Halomonas qaidamensis: K1Y77_10235 Help Entry K1Y77_10235       CDS       T08648                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism hqd  Halomonas qaidamensis Pathway hqd02020   Two-component system hqd02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:hqd00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     K1Y77_10235  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     K1Y77_10235  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hqd03021]     K1Y77_10235 Transcription machinery [BR:hqd03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      K1Y77_10235 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 Motif Other DBs NCBI-ProteinID:  UYV17874 UniProt:  A0AA94YM09 LinkDB All DBs Position 2204288..2205703 Genome browser AA seq 471 aa AA seqDB search MVMKASLQLRIGTQLTMTPQLQQAIALLQLSTLDLRQEIQQALDANPMLEQEDEFGEQAV SEPQETEWSDSIPNELSTDSDWSDTYQDLGNHSSGGEGPDFERQAAGQSLHGHLLWQLAM TDFSSRDHAIAESLIDALDANGYLTQPLNDIREGLKAQGHEGLSQREVETTLLRLQQFEP TGVFARDLRECLMLQLASLPEDTPLLMPAKRLVRQFLEALGKDDVRLLKRRLSLGDDQLD DVIRLIRSLDPRPGSAFGDTDDSYVTPDLVVRHDNEGWHLELNPEALPRLRIQPDYASLI KRADKSQDNQFLKEHLQEARWLIKSLSSRNDTLLRVGREIIARQIGFLEHGEEAMKPLIL ADIADAVEMHESTISRVTTQKYIHTPRGVFELKYFFSSQVSGQDGGDSHSSTAIRARIKK LVQDEPPGKPLSDSRLVSLLEEGGINVARRTVAKYRESMGIPSSSERRRLR NT seq 1416 nt NT seq  +upstreamnt  +downstreamnt atggtcatgaaagcttctcttcaattgcgtatcggcacacagctgaccatgacaccccag ctgcagcaggcgattgccctgctgcagctatcaacattggaccttcgtcaagaaattcag caagcacttgatgccaacccaatgcttgagcaggaagacgaattcggcgaacaggctgtt agtgaaccccaggaaacggaatggtccgacagcattcctaacgaactctccactgatagt gactggtcagacacttatcaggatctaggcaaccatagcagcggcggcgaggggcctgat tttgaacgtcaagccgctggtcaaagcttacatggccacctactttggcagctcgccatg acggatttctcctctcgcgaccatgccatcgcagaaagccttatagatgctctggatgct aatggctatctaactcagcccctcaatgacatccgcgaggggcttaaggcccaaggtcat gaagggcttagccagcgtgaagttgaaacaaccttactgcgtcttcaacagtttgaaccc accggcgtatttgctcgtgatctgcgcgaatgtttaatgttgcagctcgcctcactaccg gaagatacaccgctgcttatgcctgccaagaggctagtacgtcaatttcttgaagcgctc ggtaaggatgatgtgcgtttgttaaagcgacgtttaagcttgggtgatgatcagctagat gatgtaattcgtttgatccgcagccttgaccctcgcccaggcagcgcctttggagacacc gatgacagctatgtaacgccagacctagtggttcgccacgacaacgaaggctggcacctg gaactaaacccagaagcactgccacgactgcgtattcagcctgactacgcaagtcttatc aaacgggctgacaaaagccaggataaccagtttttaaaggagcaccttcaggaagcgcgc tggctaatcaagagcctctcaagccgaaacgatacgctactgcgtgttggccgagaaatt atcgctcgccagataggctttctggaacacggcgaagaagctatgaagccgttaatttta gcggatatcgcagacgctgtggaaatgcatgaatctactatttccagggtcaccacccag aaatatatccataccccgcgcggcgtatttgaactcaaatacttcttttccagccaagtg agcgggcaagacggaggtgacagccactctagcaccgccatccgtgcacgaatcaaaaaa ctggtgcaagatgaaccgcccggcaaacctctctcagacagccgtcttgtatcgcttttg gaagagggaggcattaatgtagcgaggcgtacagtggccaaatatcgcgagtcgatgggc attccttcttccagcgaacgtcgccgcttacgctga

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