Halomonas qaidamensis: K1Y77_16575
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Entry
K1Y77_16575 CDS
T08648
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hqd
Halomonas qaidamensis
Pathway
hqd03420
Nucleotide excision repair
hqd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K1Y77_16575 (uvrD)
03430 Mismatch repair
K1Y77_16575 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hqd03400
]
K1Y77_16575 (uvrD)
Enzymes [BR:
hqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1Y77_16575 (uvrD)
DNA repair and recombination proteins [BR:
hqd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K1Y77_16575 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K1Y77_16575 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
YfdX
Motif
Other DBs
NCBI-ProteinID:
UYV19032
LinkDB
All DBs
Position
3682814..3685012
Genome browser
AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLSISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRMLKDYSIDDERFPPRQVQGFISGCKEEGLRPHQVNVDGDGYLGQMVELYERYQF
TCERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGQ
QTPMTAVGDDDQSIYGWRGAKVENIRRFEEEFPDTHTVRLEQNYRSTSAILEAANTLISH
NSERLGKNLWTDGVEGDPISIYAGFNDLEEARYIVDTIKEKVDEGFNRRDIAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHRAREQSVSLWQALHDAIQDGTLKGRAANAVQTFANLIEQLDNDASGLPLHE
IIDHVTAHTGLIEHHKSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEADEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSIEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRSSFTQQRVESDGDLPALHVGQRVMHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLAPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatacttgatcagcttaaccctgcccagcgcgaagcggtaagc
gcgccccaaggcaacttactggtactggcgggagccgggtccggtaaaacccgcgtgctg
gttcatcgcattgcttggctaatgcaggctgaagggctttcaccgtatgccttgttggcg
gttacgtttaccaacaaagccgcgcgggaaatgcgcactcgtctggaagcgctgctgagc
atctccatgcgccatgtatgggtcggcacctttcactctatcgctcaccgcttgctgcgc
actcactggcaggatgctcggctaccacagcactttcaaatcatcgactccgatgaccag
ttacggctggtaaagcgaatgctcaaagattactccatcgatgatgagcgcttcccgccc
cgtcaggtgcagggcttcatttctggctgcaaagaggaagggctccgcccacatcaagta
aacgtggacggcgatggttatcttggccagatggtcgagctatatgagcgctatcaattt
acctgcgaacgcggcggcctagtggacttcggcgaactactactgcgcagtcttgagctg
ttgcgcgacaacccgccacttctcaaccattaccgcgaacgctttggtcatgtattggta
gacgagtttcaggacactaatacgctgcaatatgcgtggttaaagcttctcaccgggcag
caaacaccgatgaccgctgtcggtgacgatgaccagtcaatttacggttggcgcggtgct
aaagtggaaaatattcgccgctttgaggaggagtttcctgatacgcacactgtacgccta
gagcagaactaccgctccactagcgcgattctggaggccgctaacacgctgattagtcat
aacagtgagcggctaggcaaaaacctgtggactgacggtgtcgaaggcgaccctatttct
atctacgccgggtttaacgacttagaagaagcccgctatatcgtcgataccatcaaagaa
aaggtcgatgaagggtttaatcgccgcgatattgccattctttaccgctctaatgctcag
tcgcgtttactggaagagacgctgatccgccaagggatgccctaccgtatttacggagga
catcgcttctatgaacgtttagagatcaaaaatgccctcgcctacctgcggctactgctt
aatcgtgatgacgatgcctctctggagcgcgtgattaacgtgcccacccgcgggattggc
acccgcacggttgaaattgtgcgccatcgcgcccgagagcaaagcgtttcactgtggcag
gcgctgcacgatgccatccaagacggcacgctaaaaggccgtgcagccaacgccgtgcag
acatttgccaacctcattgagcaattagacaacgatgcatctggcttgccactgcatgaa
attatcgaccatgtcaccgctcatactggccttatcgagcatcacaagagcgagcgcggc
gaaaaagggcaagcgcgcgtggaaaacttggaagaactggtgaccgctgctcgcgccttt
acccatggcgatgccttcgaaacccctgaagcgggggaaggaatggcggcgctggaagca
tttctttctgaagcggcgcttaatgcaggcgaccatgaagccgatgagtttgaggacagt
gtgcaattgatgacactgcactctgccaaaggcttggagttccccgtggtgtttattgcc
ggcgttgaagagggcctgtttcctcataaaatgtcgatcgaagagccagggcgactcgaa
gaggaaaggcgactttgctatgtcggcgttacccgcgcaatgcagaagctctacctgacc
catgccgaaacccgccgtctgcacggcaaagaagtgtttcccaggccatcgcgttttcta
cgtgaacttcccccccatctattggaagaagtccgcctacgtggtcatatttcgcgtccc
gttaccgcttcacgctcaagttttacgcagcagcgtgttgaaagcgacggcgatctgcct
gctctgcatgttggccagcgggtaatgcacccagtgtttggcgaaggcattattcttaat
gcagaaggcgaaggagcccgcgctcgggttcaagtcagctttgaaggggaaggggtgaaa
tggctcgtactagggtttgccaaactcgccccactttga
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