Hymenobacter qilianensis: H9L05_04415
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Entry
H9L05_04415 CDS
T06772
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hqi
Hymenobacter qilianensis
Pathway
hqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L05_04415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hqi03019
]
H9L05_04415
Enzymes [BR:
hqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L05_04415
Messenger RNA biogenesis [BR:
hqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L05_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QNP52948
UniProt:
A0A7H0GXD2
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All DBs
Position
951163..952575
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AA seq
470 aa
AA seq
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MSDATPQPISFADFKLNKQLLTAVAEAGFTEPTPVQLQTIPLLLAGHDVLGIAQTGTGKT
AAFGLPLLMKVKYAQGTHPRALILAPTRELAIQLETHLKRLATQTDLRIFAIYGGLGPKT
QIETIAQGVDILIATPGRLLELYLKGDLVLKELKTLVLDEADKMMDMGFMPQIRRILEVI
PTKRQNVLFSATMPDKVATLSEEFLEFPVRVEVTPAATSAQNVSQALYQVPNLLTKINLL
GYLVRDEEVFNRVMIFCRTKEHADNVAHFLGRKSTGEVRAIHGNKGQNVRINAMEAFRAG
ELRFLVATDVAARGIDVPQVSHVINFDVPLIYDDYVHRIGRTGRAQHTGAAITFANAAEM
HHMGRIAELINQTIPELPLPPDVAVAPTAFDEQQGMDREIDERRRRLDPNFKGAFHEKKV
PLQKDIDKRTGLPYVEGPNRSVKGRKANPSKGRASSPAKKAAAKARGRRK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccacgccccaacccatttccttcgccgatttcaagctcaataagcagcta
cttacggccgtggctgaagcaggctttacggagcctacgccggttcagctgcaaactatt
ccgcttttgcttgccggacacgacgtgctgggtatcgcgcagacgggcaccggcaaaacc
gccgcttttggtttgcctttgctgatgaaggtgaaatacgcgcagggtacgcatccccgc
gccctgattttggcccccactcgcgaattggctattcagctcgaaacgcacctgaagcgc
ctcgccacccaaaccgatttgcgcattttcgctatctatggcggcttggggcccaaaaca
cagattgaaactattgctcagggcgttgatattctgattgccacgccggggcgcctattg
gaattatatctgaagggcgacttggttttgaaagaactgaaaaccttggtgctcgacgag
gccgacaaaatgatggatatgggctttatgccccaaatcaggcgcattctggaagttata
ccgaccaagcggcagaacgtgctgttttcggccactatgccggataaggtagcaacactg
agcgaggagtttctggagttcccggtgcgggtggaagtgactccggcggctacatctgcc
caaaatgtcagtcaggcgctgtatcaggtgcccaacctgctcaccaaaatcaacttgctg
ggctacctggtgcgcgatgaggaagtgttcaaccgcgttatgattttctgccgcaccaaa
gagcacgccgataacgtggcgcattttctggggcgcaaaagcacgggtgaagtaagagcc
attcacggcaacaagggccagaacgtacgcatcaacgcgatggaggctttccgtgctggt
gagctgcgctttttggtagccaccgatgtagcggctcgcggcatcgatgtgccgcaggta
agccacgtcatcaacttcgacgtgccgctgatttacgacgactacgtgcatcgcattggc
cgcacgggtcgggcccagcacacgggcgcggctattacgtttgccaacgctgccgaaatg
caccatatgggccgcattgcggagctgattaatcagacgattccggagttacccctgcca
cccgacgtagcggtggctcctaccgctttcgatgagcagcaaggtatggatcgggagatt
gacgagcgtcgtcgccgcctcgatccaaacttcaagggcgcattccacgagaagaaggtt
ccgctgcaaaaggacatcgacaagcgcactggtttgccttatgtggaaggcccgaaccgg
agcgtaaaggggcgcaaggcgaatccgtcgaaggggcgggcgtcgtcgccggcgaaaaaa
gcagcagccaaagcccgcggtcgccgcaaatag
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