Hymenobacter qilianensis: H9L05_17810
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Entry
H9L05_17810 CDS
T06772
Name
(GenBank) GIY-YIG nuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hqi
Hymenobacter qilianensis
Pathway
hqi03030
DNA replication
hqi03430
Mismatch repair
hqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L05_17810
03430 Mismatch repair
H9L05_17810
03440 Homologous recombination
H9L05_17810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hqi03032
]
H9L05_17810
03400 DNA repair and recombination proteins [BR:
hqi03400
]
H9L05_17810
Enzymes [BR:
hqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L05_17810
DNA replication proteins [BR:
hqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9L05_17810
DNA repair and recombination proteins [BR:
hqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9L05_17810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNP51785
UniProt:
A0A7H0GU19
LinkDB
All DBs
Position
3952670..3954157
Genome browser
AA seq
495 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITELAIFIHDGDKVVDQYETLVNPGRSIPFFITQLTGITDDM
VRDAPRFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFADLGYNYSRKTLCTVRLSRSL
IPGQPSYSLGKLCQNIGIPLEGRHRAAGDAAATAILFDRLLKISQQDEALANPAISAADT
LASVDALAPSGRPAATATKKPSVKRVTAVQEAIKTALLPPNITPEKVATLPQEAGVYYFH
DEQGEVIYVGKSINIYKRIQQHFAVDYKSRKSLEFKNSISDITWELTGSELVALLYESAE
IKRMKPFYNRQQRRSIFPAGIYLRQDEKGYKHLYYGRADADNPATPLIALANQFKAKGFL
FHKVSKFNLCQKLCDLYKTQGACFDYQVHRCKGACVGAESPEEYNLRVDEAIESFTFEHG
SFVVIGKGRSGDEKSVVVVENGRYLGFGYVDGEFSARRLADFRDVIKPYGDNKDVQQIIR
QYLRTKHKDKVKIFK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgctatcattgaccttgaaaccactggtggccagcccacgcaggaccgcattacc
gagttggccattttcattcacgatggcgacaaggtggtagaccaatatgaaacgctggtc
aatccgggccggtcgattcccttttttattacccagctcacaggtatcaccgacgacatg
gtgcgcgacgcgccccggtttcacgaggtagcgcgcaaagtggtcgaaatgaccgaaggc
tgcgtgtttgtggcccacaacgtgcgcttcgactactcgtttttgaaaaaggaattcgcg
gatttaggctacaactattcgcgcaaaacgctgtgtacggtgcgcctgagccggtcgctt
attccgggccagcccagctacagcttgggtaagctgtgccagaatattggcattccgctg
gaaggccggcaccgcgccgccggcgatgctgccgccactgccattctcttcgatcgtctg
ctcaagatttcgcagcaggatgaagcccttgccaatcccgccatcagtgccgccgacacg
ctggcctcggttgatgccctggcgcccagcggccgacccgccgctactgccaccaaaaag
cccagcgtcaagcgcgtaacggccgtgcaggaagccatcaaaaccgcacttttgcccccc
aacatcacccccgaaaaggtagctacattgccccaggaggccggcgtgtactacttccac
gatgagcagggcgaggtgatttatgtgggcaagagcatcaatatctacaagcggattcag
cagcacttcgccgtcgattataagtcgcgcaagtcgctggaattcaagaacagcatctcc
gatattacctgggagctgacgggctcggagttagtggctttgttgtatgaatcggccgaa
atcaagcgcatgaagccgttttataaccgtcagcagcggcgctccatttttccagctggc
atttatcttcggcaggatgaaaagggctacaagcacctctactacggccgcgccgacgcc
gataatccggccacgccgcttattgcgctggccaatcaattcaaggccaaaggctttctg
tttcacaaagtttccaagttcaacctctgccagaagctctgcgacctgtacaaaacccag
ggtgcctgcttcgattatcaggtgcaccgctgcaagggcgcgtgcgtgggcgctgagtcg
ccggaagagtataacctgcgcgtggacgaggccatcgagagcttcacatttgagcacggc
tccttcgtagttatcggcaagggccgcagcggggatgagaagtcggttgtggtggttgaa
aatggacgctacttaggcttcggctacgtggatggcgagttctcggcccgccgcctggcc
gatttccgcgacgtcatcaagccctacggcgacaacaaggacgtgcagcagattatccgc
caatatctgcgcaccaagcacaaggataaggttaagatttttaagtag
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