Halomonas qinghailakensis: M0220_00750
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Entry
M0220_00750 CDS
T10463
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hqn Halomonas qinghailakensis
Pathway
hqn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0220_00750 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hqn03021
]
M0220_00750 (rho)
03019 Messenger RNA biogenesis [BR:
hqn03019
]
M0220_00750 (rho)
Transcription machinery [BR:
hqn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
M0220_00750 (rho)
Messenger RNA biogenesis [BR:
hqn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M0220_00750 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
AAA_25
AAA_19
AAA_16
AAA
ABC_tran
NACHT
AAA_22
AAA_30
nSTAND_NTPase5
ATPase_2
AAA_24
ResIII
cobW
NB-ARC
nSTAND3
Rad17
AAA_18
AAA_17
Viral_helicase1
Mor
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UYO74723
UniProt:
A0AA46YQL0
LinkDB
All DBs
Position
complement(151319..152275)
Genome browser
AA seq
318 aa
AA seq
DB search
MARKTLSLKTKKQIDTKPADEVEDQFPEVPEKRFLNGVAVHPSPRIVLELGSKQRSVRAM
DLITPIGMGQRGLIVAPPGSGKTTMLKHICQAVAAAHPDIKLYALLIDERPEEVTDFKRS
VSADVHASSSDESYTHHVRLADKLLEMARKQAGEGHNVMIVIDSLTRLARVHNAEQRGNG
RTMSGGLDSRAMEIPRKLFGAARKIENGGSLTILATVLVDTGSRMDQVIFEEFKGTGNME
LVLSREVANQRIFPAIDIAKSSTRREELLIDAKDIEKVRTLRRALTPLKPVESAQKLLAL
LEKYPTNAELLDAFSPAE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaaaaacactcagtttgaaaacaaaaaaacagatagataccaagcccgccgac
gaagtggaagatcagttccctgaggttcccgaaaaacgttttttaaatggcgtggctgtt
catccttccccacgcattgttttagagcttggttctaagcagcgaagtgtgcgggcgatg
gatttgattacgcccatcggcatggggcaacgcgggttgattgttgcgccgccgggctct
ggcaagacgacgatgttaaaacatatctgtcaggccgtggcagccgctcatccggatata
aagctgtatgccttgctgattgatgagcgccctgaggaagtgaccgattttaagcgcagt
gtgtcggcagacgtacatgcctcgtcttcagacgaaagctacacgcaccatgtgcgcttg
gcagacaagctgcttgagatggcgcgtaagcaagcaggcgagggtcataatgtgatgatt
gtgatcgattcgcttaccagactcgcgcgcgttcataatgctgaacagcgcggcaatggt
cgtacgatgtcgggtgggctggatagccgtgcaatggaaataccgcgaaaactgtttggc
gctgcgagaaagatcgaaaacggcggatcgctcacgattctggctactgtgctggtggat
acgggaagccgtatggatcaggtgattttcgaggagtttaagggcacgggcaatatggaa
ctcgtgttatcacgggaagtggcaaatcagcgaattttcccggcgatagatattgccaaa
agcagtacccgtcgagaagagctgttgattgatgctaaagatattgaaaaagttaggacc
ttgcgtagagcgttaacaccccttaagcctgttgaaagcgcgcagaagctacttgcgctg
ttggagaagtaccccacgaatgcggagctgttggatgctttttcgcccgctgagtag
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