Halomonas qinghailakensis: M0220_05110 Help Entry M0220_05110       CDS       T10463                                  Symbol polA Name (GenBank) DNA polymerase I   KO K02335   DNA polymerase I [EC:2.7.7.7] Organism hqn  Halomonas qinghailakensis Pathway hqn03030   DNA replication hqn03410   Base excision repair hqn03420   Nucleotide excision repair hqn03440   Homologous recombination Brite KEGG Orthology (KO) [BR:hqn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     M0220_05110 (polA)    03410 Base excision repair     M0220_05110 (polA)    03420 Nucleotide excision repair     M0220_05110 (polA)    03440 Homologous recombination     M0220_05110 (polA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:hqn03032]     M0220_05110 (polA)    03400 DNA repair and recombination proteins [BR:hqn03400]     M0220_05110 (polA) Enzymes [BR:hqn01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      M0220_05110 (polA) DNA replication proteins [BR:hqn03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      M0220_05110 (polA) DNA repair and recombination proteins [BR:hqn03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA polymerase I      M0220_05110 (polA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      M0220_05110 (polA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Motif Other DBs NCBI-ProteinID:  UYO75539 UniProt:  A0AA46TSY1 LinkDB All DBs Position complement(1101603..1104377) Genome browser AA seq 924 aa AA seqDB search MARAPIVLVDGSSYLYRAFHALPPLTTSSGQPTGAVKGVLNMLKRLIKDYPESPMAVVFD APGKTFRDEMYSDYKAHRPPMPDDLRSQIKPLHACVKALGLPLLCIEGVEADDVIGTLAH HATQAGRDAVISTGDKDMAQLVNAHITLVNTMKEETLDEAGVKEKFGLPPALIIDFLALM GDKVDNIPGVPGVGEKTAIGLLQGMEGGLETIYGDLERVKTLSFRGAKTLPKKLEEHREQ AFLSYQLATIKTDCDLPVGLDDLDIAHPDREALVELYKEMEFKQWLAELLAGNDEGVDDV KGGEPAPNNADIDTADNTATASQRDDHIIVEQAEFEVWLARLKKAERFCFDLETTSLNYM DADIVGVGLALEAGEAAYIPLAHDYLDAPAQLDRQQVLQALKPLLEDPKKTKIGQNLKYD ISVLANYDIGVVGPLADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGAKQL TFNQIALEQAVPYACEDVDITLRLQDILRPQVEREGRLAEVLDHLELPLINVLSRIERNG VALDAERLHEQSQQLERRIRELESEAFELAGREFNLGSPKQLGQILFEEQKIPVIKKTPK GAPSTAEAVLEELALDYPLPKVIMQHRGLAKLKSTYTDKLPRLLNKTTGRVHTSYHQAVT ATGRLSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSEDKGLL SAFAEGRDIHTATAAEVFGTALEKVSADQRRSAKAINFGLIYGMSAWGLSRQLHIDRNQA QTYIDRYFDRYPGVASYMDRIRTQAAEDGFVETVLGRRLYLPEIHSQNRNRRQGAERTAI NAPMQGTAADIIKQAMIDVDAWLAEGDFDALMVMQVHDELVFEVADAQVEAFIEQVQTRM QAAATLNVPLIVEAESGANWDEAH NT seq 2775 nt NT seq  +upstreamnt  +downstreamnt atggcccgtgcccctatcgtgcttgtcgatggctcctcgtacctatatcgcgcctttcac gcgctaccaccgttaacgacctctagcggccagcccacaggagctgtgaaaggcgtcttg aatatgctcaagcgtctgatcaaagattatcccgaaagcccaatggctgtggtgtttgat gcgccaggaaaaacctttcgcgatgagatgtatagcgactataaagcccaccggccgccc atgccggacgatttgcgcagccaaattaaaccgctacatgcctgtgtaaaagcactaggc ttaccgcttctgtgtattgaaggggtggaagccgatgatgtgattggcacgctggctcac catgccacccaggctggccgtgatgcggtgatctcgaccggcgataaagatatggcgcag ttggtaaacgcccatattacgttggttaataccatgaaagaggaaacgctcgacgaagcg ggtgttaaagaaaaatttggtctccctccagcgctgattattgatttcttggccctgatg ggtgacaaggttgataacattcccggcgtgccgggggtgggcgaaaagactgccattggt ctattacaaggcatggaaggtggtttagagacaatttatggtgatctggaacgcgtcaaa acgcttagtttccgtggcgcgaaaacgttaccgaagaagcttgaagagcaccgtgagcag gcctttctctcttatcagctagcaaccattaagaccgactgtgacctgcccgtggggctg gatgacttggatattgcgcatccagaccgcgaagcgctggtggaactctataaagagatg gagtttaagcagtggttggctgagctgctggcaggcaacgacgagggtgttgatgacgtt aagggtggcgagcccgcgcctaataatgccgatattgatacggccgataataccgcgacc gctagccagcgcgatgaccatatcattgtagagcaagctgagtttgaggtgtggttagcg cgtctgaagaaagccgagcgtttttgcttcgatttagaaaccactagcttgaattatatg gacgccgatattgtaggcgttggtttggcacttgaagccggtgaagccgcctatatcccc ctggcccacgactacctggatgcgcccgcgcagcttgatcgccaacaggtactacaggcg ttgaagccgctactggaagatcctaaaaaaaccaagatcggccagaaccttaagtacgat atttccgtgctagcaaactatgatattggtgtggtgggcccgctggccgacaccatgctc gcttcttacgtactgaactccaccgccactcgccacgacatggattcgctggcgctgaag tatctgggcgaaaaaaccatctccttcgaagagatcgcaggaaaaggggcgaagcagctc acgtttaaccagattgccttagagcaagcggttccttatgcctgtgaagatgtggatatc acgttgcggctgcaagacatactgcgtccccaggttgaaagggaagggcgtttagcagag gtgctggatcaccttgaattaccactgattaacgtgctgtcgcggattgagcgcaatggc gtggcgttggatgccgagcgcctccacgaacagagccagcaactagagcgacgtattcgc gagcttgagagtgaagcgtttgagctagcaggtcgtgagtttaaccttggttcacccaag cagttggggcagattctgttcgaagagcagaagattccggtgatcaagaaaacccccaaa ggcgcgccctcaaccgccgaagcagtgctagaagagctggcgctagattatccgttgccc aaggtgattatgcagcaccgtgggttggcaaagctgaaatctacctataccgataagcta ccgcgcctgctcaataaaacgacggggcgggtgcataccagctatcaccaagcggtaaca gcgacagggcgtctctcgtcatctgaccctaacttgcaaaacataccgattcgtacagaa gaggggcgcaaaatccgccaagcgtttgtggcgcgtccaggctatcgcattgtggcggcc gactactcgcaaattgagctgcgcattatggcgcacctgtctgaagataaaggcttgtta agtgcttttgcagaagggcgagatatccacaccgcaactgccgctgaagtgttcggtacc gcgcttgaaaaggtttctgccgatcagcggcgcagcgccaaagccatcaactttggcctg atttacggcatgagtgcctggggcttgtcacgccagctgcatattgaccgcaaccaggcg caaacttatatcgaccgctattttgaccgttatcctggcgttgctagctatatggatcgt attcgcacccaggccgcggaagatggctttgtagaaaccgtgctagggcggcgtttgtac ctacccgagatccactcgcaaaaccgcaaccgccgtcagggcgctgagcgcactgcgatt aatgcgcccatgcagggcacggcagcagacattattaagcaggcgatgattgatgttgat gcttggcttgctgaaggcgatttcgatgcactcatggtcatgcaggtacacgatgagcta gtgtttgaagtggccgacgcgcaagttgaggcgtttatcgagcaggtccaaacacgaatg caagccgccgcgaccctaaacgtgccactgattgttgaagcggaaagcggtgctaactgg gatgaagcccactag

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