Halomonas qinghailakensis: M0220_05435
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Entry
M0220_05435 CDS
T10463
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hqn Halomonas qinghailakensis
Pathway
hqn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M0220_05435 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hqn03400
]
M0220_05435 (mutM)
Enzymes [BR:
hqn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M0220_05435 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M0220_05435 (mutM)
DNA repair and recombination proteins [BR:
hqn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M0220_05435 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
UYO75595
UniProt:
A0AA46TSB1
LinkDB
All DBs
Position
complement(1172849..1173676)
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AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGVAPYIEGQEITEVLVRHSRLRVPVPEDLADRLIGARIGVLKRRAKYL
QIPVMRSEREATLLWHLGMSGSLRIAKVGDLPKKHDHVDVVTANGHVLRYHDPRRFGFVD
WQQGDGSLDTRLAHLGPEPLDDAFNGRWLYNASRNKRVAVKPFLMDNRVVVGAGNIYAAE
ALFMAGIDPRRAAGKISLARYQQLAIAVKEVLSAAITQGGTTLRDFVSGQGEPGYFAQQL
NVYGRHGQPCLRCGVELRRITLGQRASVFCPGCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcctgaagttgaaacaacgcggcgtggcgttgccccttatatcgaaggg
caagaaattaccgaggtgttggtaaggcactctcgtttgcgcgtaccagtgcccgaggat
ctagccgatcgactaataggcgcgcggattggcgtattaaagcgccgtgctaagtacctg
caaattcccgtgatgcggtctgagcgtgaggccacgttgctgtggcacttaggcatgtcg
ggtagcctgcggattgccaaggttggtgatttgcccaaaaaacatgaccatgttgatgtg
gtgacggccaatggccatgtgctgaggtatcacgacccgcggcgatttggttttgttgac
tggcagcagggcgatggtagtttggatacgcgcctagcgcaccttggtcctgagccgtta
gatgatgcgtttaacgggcgttggctctataacgcctcccgtaataaacgcgttgcggta
aagccttttttaatggataaccgcgtggtggtgggtgcgggtaatatttacgctgctgaa
gcgctgtttatggcaggtatcgacccgcgtcgcgccgccgggaaaatttccctagcccgt
tatcagcagctggccattgcggtaaaagaggtgctgtcggcggcgattactcagggcggt
accacgctgcgagattttgtcagtggccagggcgagccaggctactttgcccagcaactg
aacgtttatggacgccatgggcaaccctgcctgcgctgtggcgttgagctgcgacgtatc
acgcttggtcagcgggccagtgtattttgccctggatgccagcggtag
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