Halomonas qinghailakensis: M0220_05480
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Entry
M0220_05480 CDS
T10463
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hqn Halomonas qinghailakensis
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hqn03021
]
M0220_05480 (rpoH)
Transcription machinery [BR:
hqn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M0220_05480 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
SWC7
Motif
Other DBs
NCBI-ProteinID:
UYO75604
UniProt:
A0AA46TSD6
LinkDB
All DBs
Position
complement(1180372..1181238)
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AA seq
288 aa
AA seq
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MSTSLLPVGQLSPGHDLGGYIKAVNGIPVLSIDEERELAFRLHDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRSAKKRLAWLNNDEVNAIAKDLDVKPEIVRDMEGRLSAYD
AGFDASPSDDEESTYQAPAYFLDDASADPATLLEDSNFEEDSTRRLQLALKGLDERSRDI
LQRRWLTDNKATLHDLADVYGVSAERIRQLEKNAMKKLRQKMGDAIAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttctaccggtgggtcagctctctccaggtcacgatctgggcggctac
atcaaggcggttaacggaattcccgtactaagcattgatgaagagcgtgagcttgcattc
cgcctccacgatgaaggtgatctggaagctgcgcgtcgtctggtgctttcgcacctgcgt
tttgttgtgcatattgctcgtagttattcaggttacggtttgccacaggctgacttgatt
caagaaggtaacgttggtctgatgaaagccgttaagcgctttgaccccaatcaaggggtt
cgcttggtgtcttttgccgtgcattggatcaaagcggaaattcacgagtttgtgcttcgc
aactggcgaatcgtcaaaattgccactaccaaagcgcagcgcaagttgttttttaatctg
cgtagcgccaaaaaacgtttagcctggctgaataatgatgaggtcaatgcgattgcaaaa
gatctcgatgtgaagccagaaatagtgcgcgatatggaaggacgtttgtcggcttacgat
gcgggctttgatgcctctcctagtgacgacgaagagagcacctatcaagcaccggcgtac
tttttagatgatgcttcagccgatccggcaacgctgttagaagacagcaactttgaagag
gattcaacgcgtcgcttgcagctagctttgaaggggcttgatgagcgttcgcgggatatt
ttgcagcgtcgctggctgaccgataataaagcgacactgcacgacttagctgatgtgtat
ggcgttagcgctgaacgcattcgtcagctcgaaaagaacgctatgaaaaagttgcgtcag
aaaatgggcgacgctatcgccgcttaa
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