Halomonas qinghailakensis: M0220_06100
Help
Entry
M0220_06100 CDS
T10463
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hqn Halomonas qinghailakensis
Pathway
hqn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M0220_06100 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hqn03019
]
M0220_06100 (pnp)
03016 Transfer RNA biogenesis [BR:
hqn03016
]
M0220_06100 (pnp)
Enzymes [BR:
hqn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M0220_06100 (pnp)
Messenger RNA biogenesis [BR:
hqn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M0220_06100 (pnp)
Transfer RNA biogenesis [BR:
hqn03016
]
Prokaryotic type
tRNA degradation factors
M0220_06100 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UYO75720
UniProt:
A0AA46TSF0
LinkDB
All DBs
Position
complement(1311348..1313513)
Genome browser
AA seq
721 aa
AA seq
DB search
MLKEVAVNPVKKTFQYGRSTVTLETGRIARQATGAVMVTMDETVVLCTVVAKKEANPNQP
FFPLSVHYQEKTYAVGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQIIC
TVLSTDRNHDPDIAALLGTSAALGIAGVPFNGPIGAARVGFNEEQGYFLNPTVEELTTSE
LDMVVAGTENAVLMVESEAQELLEDEMLGAVLFGHQEMQVAVSAIKELVAEAGKPRWDWQ
PAAENVALKTAIADAFEAKVGDAYRITDKMARQDALSALKDDAVAQLVAAEGEEETEGKF
SKDDVKGAFSALEKRVVRSRVVKGEPRIDGRDNTTVRPLAIEVGVLPKTHGSAVFTRGET
QAIAIATLGTLRDSQLIESLEGERKDRFMLHYNFPPYCVGEAGFFGGPKRREIGHGRLAR
RGVQAMLPSEDVFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGL
VKDEDGYAVLTDILGDEDHLGDMDFKVAGSEEGVTALQMDIKIEGINEEIMEKALQQAYD
ARISILAQMNDVISQSRTDVSENAPSMATIKIAPDKIRDVIGKGGATIRKICEDTGASID
LDDDGTVRIYAEDKAAAKKAIDTVLAITAEAEIGKLYNGKVVRIADFGAFVNIMPGTDGL
VHISQIVAERVNNVRDFLNEGDDVIVKVLDIDNRNRVKLSIKEITEEEKAAFAAAEADVA
N
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggaagtcgccgtgaatccggtaaaaaaaacgtttcaatacggtcgtagcacc
gtcaccctagaaactgggcgtatcgctcgccaagccactggcgccgttatggtgaccatg
gatgaaactgtcgtactgtgtacggttgtggccaagaaagaagcgaatcctaatcagccc
ttcttcccgctctcggtacactaccaagagaaaacctatgcagtgggtaaaattcccggc
ggcttctttaagcgtgaagggcgtcctactgagaaagagacccttacctcgcgtctgatt
gatcgcccgattcgtccgctgtttcctaaagggtttatgaatgaagtacagataatctgt
actgtgctatcgacggatcgtaatcatgacccagatattgcggcactactgggcacctcg
gcagcgttggggattgcaggtgtgccgtttaacggcccaattggcgcagcgcgcgttggc
tttaatgaagagcagggttacttcctcaatcctactgttgaagagctgaccacctctgag
ctggatatggtggttgccggtaccgaaaacgccgtattgatggtggaatcggaagcccaa
gaactgcttgaagacgaaatgctcggtgccgtgctgtttggtcaccaggaaatgcaggtt
gccgttagcgcgattaaagagctggtcgcggaagcgggcaagccgcgctgggactggcag
ccagctgcagaaaatgtcgcgctgaaaacggctattgccgacgcttttgaagccaaagtg
ggtgatgcttaccgcattactgacaaaatggcgcgtcaagatgcgctgtcagcgctgaaa
gatgatgctgttgcgcagctagtagctgctgaaggtgaagaagagacagaaggcaagttc
agtaaagatgacgtgaaaggtgcgttttctgcccttgagaagcgcgttgtgcgttctcgc
gtcgtaaaaggcgagccacgtatagatggccgcgacaacaccacagtacgcccgctggca
atcgaagtcggcgtactacctaagacccatggttcagcagtatttacccgtggcgagacc
caggcaatcgcgattgctaccttgggcaccctgcgtgactcacagctaatcgagtctctg
gaaggcgagcgtaaagaccgctttatgctgcactacaacttccctccctactgcgttggt
gaagctggcttctttggcgggccaaagcgtcgtgaaattggccatggtcgcttagcacgc
cgcggcgttcaggcgatgctgccatcagaagacgtcttcccctataccatccgtgtggta
tcggaaatcactgaatctaacggttctagctccatggcgtcagtgtgcggttcctcactc
gcgctgatggatgctggtgtgccgttaaaagcaccggtggcaggtattgccatgggctta
gtgaaagatgaagacggctatgcggtattgaccgacatcttgggtgacgaagatcacctg
ggcgatatggacttcaaagttgctggttctgaagagggcgttactgctctgcagatggac
attaagattgaaggcatcaatgaagagatcatggaaaaggcgctacagcaggcctatgac
gcccgcattagtatccttgctcagatgaatgacgttattagccaaagccgtaccgatgtg
tcagaaaacgcgccgtccatggcgacgatcaaaatcgctccggacaagattcgtgacgtg
atcggtaaaggcggcgcaacaatccgcaaaatttgcgaagataccggtgcctctattgat
ctggatgatgacggcactgtacgcatctacgcagaagacaaagcggcagccaaaaaagcc
attgatactgtgctggcaattaccgcagaagcggaaattggcaagctttacaatggcaaa
gtagttcgtattgcggactttggcgctttcgtcaacatcatgccgggcactgacggcctg
gttcacatctcgcaaattgttgctgagcgcgttaacaacgtgcgcgatttcttaaatgaa
ggcgatgatgtgattgtgaaagtgttggatatcgacaaccgcaaccgagtgaagctctca
attaaagagatcactgaggaagagaaagcagcgttcgccgctgccgaggcggacgtcgct
aactaa
DBGET
integrated database retrieval system
