Halomonas qinghailakensis: M0220_06110
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Entry
M0220_06110 CDS
T10463
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hqn Halomonas qinghailakensis
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hqn03016
]
M0220_06110 (truB)
Enzymes [BR:
hqn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M0220_06110 (truB)
Transfer RNA biogenesis [BR:
hqn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M0220_06110 (truB)
Prokaryotic type
M0220_06110 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UYO75722
UniProt:
A0AA46TUE5
LinkDB
All DBs
Position
complement(1314040..1314960)
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AA seq
306 aa
AA seq
DB search
MARRRRGLPVNGVLLLDKPKGISSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGTVIEQREIPSLTAEDVESVLARFHGEID
QVPPMYSALKHQGKKLYELAREGKHVERAARRVSVYDARLLAFEGTAFELEVSCSKGTYI
RTLAEDIGYALGCGAHISQLRRLKTGPFTGDAMWTLEGLEALADQATREAELMPADVLVD
HLPSLTVDETAFGRLAHGQSASLAIDTLEPDALARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgccgtcgtggattgccggttaacggcgtactgctgctggataagcctaag
ggcatttctagtaatcatgcgctgcagcgtgtgcgtcgtctgtttgaggcgcaaaaagcc
ggtcatactggcacgctggaccccatggcaacaggtttattgcctatttgtcttggggaa
gccactaagttttccgcgcacctgctagaagccgacaagatgtaccgcacccgcgtagaa
ctgggggtgatcaccgacaccggcgatgccgaaggcacggtcattgagcagcgagagatt
cccagcttaacggctgaggatgtcgagtcagtcttagctcgctttcacggcgagattgac
caagtgccgccgatgtattcggcattgaagcatcaaggcaaaaagctttatgagcttgcc
cgtgagggtaagcacgttgagcgtgcagcgcggcgagtaagcgtgtatgatgcgcggctg
cttgctttcgagggcactgcctttgaactggaagttagctgtagcaaaggcacttatatt
cgcaccttggctgaagatattggctatgccttgggctgtggtgcccacattagtcagttg
agaaggctcaaaacagggccttttaccggcgatgcgatgtggacgctggaaggccttgag
gccttggcagaccaggccacccgcgaggctgaactaatgcctgcggatgtgctggttgat
catttgccgtcgctgacggtagatgaaacggcttttgggcgtcttgcacacggtcagtcg
gctagtttagcgattgatacgcttgagcctgatgcgctagcaagactttattacgctgag
acgtttatcggccttggcgttgtaaaaggagctcaggaagtagctcccaagcggctgtta
agtaccgtcgctatctcgtaa
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