Halomonas qinghailakensis: M0220_06900
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Entry
M0220_06900 CDS
T10463
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
hqn Halomonas qinghailakensis
Brite
Transcription machinery [BR:
hqn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
M0220_06900 (rapA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UYO75865
UniProt:
A0AA46TSS8
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Position
1461385..1464330
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AA seq
981 aa
AA seq
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MSDFSPGQRWISDGEAELGLGTVLNCDARSVTILFSASQETRTYNTRQAPLTRVMFGSGD
RVISADGWQMIVDDSKETNGLITYIGEDSSGLPRELSEAKLADTMQFDQARDRLLTGQVD
RNDWFDLRFRTLHHYQRIEQHSALGFAGPRIDLIPHQLYIADEVAGRHAPRVLLADEVGL
GKTIEAGLILHRLLLAGRVERALILVPDSLTHQWLVELLRRFSLNVSLLDEHQSLAHGSA
NPFESAQIVLASQGWLFANIHRQEQAQASQFDLLIVDEAHHLDWSPDGSGPGYQCVEQLA
ADIPGLLLLTATPEQMGVESHFARLRLLDAERYHDIERFKDEEHHYIAVAQAIDALDELP
DNGEARKRVDNVADDRDSQALLATLCNPEASAEQQDAARAQLRDALLDRHGTGRVMFRNS
RRHVGGFPERRLHLAQLELPSAYRRVLRRLERDDDYLDELLIETGMDHPDVLIYPDSMYR
ELSNDPLNTESWWHIDPRVNWLLEKLSDDSESGFANDKVLIIAHHRETAEGLAEGLRVLG
GYHAPVFHEGLSLVERDRAAAAFADEEDGCQVLVCSEIGSEGRNFQFCRHLVMFDMPQHP
DQLEQRIGRLDRIGQRHAIELHVPTFTGSPGERLLRWYHEGMDAFSAPHGIGSDLYDAFG
DALADALLDDEMLDEIIDETRQMFTAKLAERDAGRNRLLELNACRPARAQQVIEAVRELD
EDPALPRFVERALDIFGVDSQDIGNGLLYLQPSQHMLDGLPGLVKGEEGFSATYSRALAL
ARDDIQRLSWEHPLLREMMERILDGTMGNTALALLRHPAIPSGRLMAELVFRTHCPAPKS
LHLNRFLPPTAVRVLLDESGANLTSKISFTGLGKNLQKVNKSLARDLIKSRHDQLRGLLI
QGEGEAERELPSIVENAETRMRAQLDAELARLTALAEHNPAVRSEELEALKQERKALSDA
IENTRLRLDSVRVIITVDPNA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttttctcccggccagcgctggattagcgacggcgaggctgagcttggactc
ggcaccgtgcttaactgcgacgcccgtagcgttaccattttgttcagtgccagccaggaa
acccgtacctacaacacccgccaagcgcccttgacccgcgtcatgtttggcagcggcgac
cgcgtaatttctgctgatggctggcagatgatcgtagacgatagcaaagagaccaatggc
ttaatcacctacattggtgaagatagcagcggccttcctcgtgagctctctgaagcaaag
cttgccgacaccatgcagtttgatcaggcgcgcgatcgactgttgaccggccaagttgac
cgcaatgactggtttgatctgcgctttcgcacgctgcaccactatcagcgcatcgagcag
cacagcgctctgggctttgcggggccgcgcatcgacctgattcctcaccagctgtatatc
gctgacgaagtggcaggtcgccatgccccgcgcgtactgcttgcagacgaagttgggctg
ggtaaaacgattgaggcgggcctgattctgcaccgtctgcttctggctggccgagtagaa
cgcgcgttgatattggtgccagacagccttacccaccaatggctggtcgagctgttacgc
cgtttctcactcaatgttagcctgctggatgagcaccaaagtctcgcccacggcagtgcc
aatccatttgaaagcgcccaaattgtattggctagccaaggttggctgttcgccaatatt
caccgccaagagcaggcccaggcgagccagtttgatttattgatcgttgatgaagcccat
catcttgactggagccctgatggcagcggcccaggctatcagtgtgttgagcagcttgct
gctgatattcctggcttattgctgctgacggctacgccagagcagatgggtgttgagagt
catttcgctcgcttgcgcttgctagatgccgagcgttaccacgatatcgaacgctttaaa
gacgaagaacatcattacatcgctgtcgctcaagccattgatgccttggatgagctaccc
gataacggcgaggcgcgtaaacgggtagataatgtagcggacgaccgtgacagccaggcg
ttgctagcaacgttgtgcaaccctgaggcaagtgctgaacagcaagatgctgcccgcgct
cagttgcgcgatgcgctgcttgatcgtcacggtactggacgagtcatgttccgcaacagc
cgtcggcatgtgggagggttcccggaacgtcgtttgcaccttgcccagctggaactgcca
tcagcctaccggcgcgtgctgcgccgcttagaacgcgatgatgattacctggatgaactg
ctgattgaaacgggcatggatcatcccgacgtgttgatttatccagacagtatgtatcgc
gagctcagcaatgatccgcttaacaccgaatcctggtggcatatcgacccacgggtaaac
tggctactggaaaagctgagtgacgatagcgaaagtggcttcgccaacgataaagtactg
attattgctcaccatagagaaaccgctgaaggacttgccgaaggattgcgcgtcctaggc
ggctatcacgcaccggtgttccacgaaggattatcgctggtggagcgtgaccgtgccgca
gcggcatttgctgatgaagaagacggctgccaagtgctggtatgctctgaaatcggctca
gaaggccgcaactttcagttctgccgccacttggtgatgtttgatatgccccagcacccc
gaccagctggagcagcgcattggccgcctcgaccggatagggcagcgccacgccattgaa
cttcatgtccccaccttcactggcagcccaggcgaacggctactgcgctggtatcatgag
ggcatggacgcgttcagtgctcctcacggcattggcagcgatctgtatgatgcctttggt
gatgctttggctgatgccctactcgacgatgaaatgcttgatgaaatcatcgacgaaacc
cgccaaatgttcaccgcgaaactggctgagcgggatgctggccgtaaccggctgttagag
ctaaacgcctgtcgccctgcccgtgctcagcaggtcattgaggcggtgcgtgagttggac
gaagatccagcgttgccacgttttgtagagcgcgccctggatatttttggggtagatagc
caagacattggcaatggcctactttatttgcagcctagtcaacacatgctggacggctta
ccagggctggtgaagggggaagagggcttttcagccacttatagccgcgcactggcactt
gcacgagacgatattcagcggctctcttgggagcacccgctgctgcgcgaaatgatggag
cgtatattagatggcactatgggtaatacggcgcttgcgctactgcgccatccagcgatt
cccagtggccgcttaatggctgaattggtcttccgcacccactgccctgcccccaaatca
ctccacctcaaccgcttcttgccgcctactgctgtgcgtgtcctgcttgatgaatcaggc
gcaaacctaactagcaagatctccttcaccggacttggcaaaaacctgcagaaagtgaac
aagtcgctggcaagggacttgatcaaaagccgccatgaccaactgcgcggcttgcttatt
cagggtgaaggtgaagctgaacgtgagttacccagcatcgtagaaaacgctgaaacacgc
atgcgtgcccaacttgatgcagaacttgctcgcttaaccgccctggcagagcacaatcca
gcggttcgtagtgaagaactggaggcattgaagcaagaacgtaaagcacttagcgacgca
atagaaaacacccgcctgcggctcgattccgtgcgggtgattatcactgtcgaccccaat
gcctga
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