Halomonas qinghailakensis: M0220_06920
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Entry
M0220_06920 CDS
T10463
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hqn Halomonas qinghailakensis
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hqn03400
]
M0220_06920 (phrB)
Enzymes [BR:
hqn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M0220_06920 (phrB)
DNA repair and recombination proteins [BR:
hqn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M0220_06920 (phrB)
Prokaryotic type
M0220_06920 (phrB)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UYO75869
UniProt:
A0AA46TTJ7
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All DBs
Position
1467706..1469118
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AA seq
470 aa
AA seq
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MNLQLVWLRSDLRIHDNSALAAAAAKGPVVAVFLRSVAQWQEHGHGANKLDFWSRGVAAV
KASLNGLNIPLLHRDIDHYDEAASTLVDIARTYQITQLHFNYEYALNEQRRDHAVLEAFE
KEGITAQGHHDAVAFAPGSLLTGKGDYYGVFTPFSKAWHKQVTAEQLALRDTPKVQSPLE
IDSDSLPALPNLDDTAVDGRLWPAGENAASDNLERFLRFRGRHYQQQRDFPKVRGTSELS
PYLALGMISHRQCLQAVMSENGGHLADGDAGLTTWVNELIWREFYQHVAVGFPQVCRYQP
FQEHTKQLRWRDDNKGFNAWCEGRTGYPIVDAAMRQLVTTGWMHNRLRMITAMFLSKHLL
IDWRRGEAFFMRHLVDGEFCANNGGWQWAASTGTDAAPYFRIFNPTTQSTRFDPDGEFIA
HWLPTLSALPAKARHAPPQDMLNPTDYPPPIVDHKAARQRALDAFKALTK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcagcttgtttggctgcgtagtgacttacgcattcacgataactccgcgctt
gccgctgctgctgccaaaggccccgtggtagccgtattcctgcgcagcgtagctcagtgg
caagaacatggacatggtgctaacaaactcgacttctggtctcgcggcgtggctgcggtt
aaagcatcgctgaatgggctgaacattccactcctacaccgcgacatcgaccattacgat
gaagcggctagcacactagtggatatcgcccgcacgtatcagataacccagcttcatttt
aattacgaatatgcattgaatgagcagcgccgcgatcatgctgtgcttgaggcgtttgaa
aaagaagggataaccgcccaaggccaccacgatgccgttgcttttgcacctggcagcttg
ctaacgggaaaaggcgactattacggcgtatttactccgttctcaaaagcgtggcataag
caggtgactgcggaacaactagcgcttcgcgacacgccgaaggtgcaatcgccactagag
attgacagcgactcacttcccgcactgcctaatcttgacgatactgccgtggatggccgc
ttatggccggctggcgaaaatgcggctagcgacaatcttgaacgctttttacgctttcgc
ggtcggcactatcagcagcagcgggacttccctaaggtacgcggcaccagtgaactttca
ccctatctggcactaggcatgatctctcaccgccaatgtctccaggcagtgatgagcgaa
aatgggggacatttagctgacggtgatgccggactgacaacatgggtcaatgaacttatt
tggcgtgagttttatcaacatgttgcagtaggtttcccccaagtttgccgctatcagcca
tttcaggagcacaccaagcagcttcgttggcgtgacgacaacaaaggctttaatgcatgg
tgtgaaggccgcaccggctatccaattgtggatgcggccatgcgccaactagtgaccaca
ggctggatgcacaaccgcctgcgcatgatcaccgcaatgtttttaagtaagcacctactg
atcgactggcgacgtggtgaagcattttttatgcgccacttggtcgatggtgagttttgc
gcgaataacggtggctggcagtgggcggcatcaacgggcacggatgcagcgccttacttc
cggatttttaaccctactacccagtcaacgcgctttgatccggatggcgaatttattgcc
cactggttgccaactcttagcgcattgcctgctaaagcgcgccatgcgccgcctcaggat
atgctaaatccaacggactacccaccgcctatcgttgatcataaagctgcgcgccagcgt
gctttggatgcctttaaagcgctaactaaatag
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