Halomonas qinghailakensis: M0220_13950
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Entry
M0220_13950 CDS
T10463
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hqn Halomonas qinghailakensis
Pathway
hqn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M0220_13950 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hqn03400
]
M0220_13950 (recB)
Enzymes [BR:
hqn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M0220_13950 (recB)
DNA repair and recombination proteins [BR:
hqn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M0220_13950 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
DUF294
Motif
Other DBs
NCBI-ProteinID:
UYO73967
UniProt:
A0AA46TQZ8
LinkDB
All DBs
Position
complement(3066769..3070527)
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AA seq
1252 aa
AA seq
DB search
MTTLPSTESSSTPLALGLPLRGSQLIEASAGTGKTFTIALLYVRLVLGHGQPDDDSHSFT
NGFTMPLVPPDILVVTFTEAASQELKDRIRARLVQAAEAFRATEGDDGLHQSDPLLAQLR
DDYPRAHWPLCARRLEVAAEWMDDAAISTIHSWAQRMLKEHAFDSGKLFHQEIVKDLSSL
TQEAVFDYWRTRIYPMDAPMAGVMMELFASPIALHGALRTLLQRHDVQLCFAGAPLPKKD
LQAQLRGLLPAREALNEAEDKARQAYCQDAEAIHQALHGLRSKLNGNKFRGKNDDTTFAS
WLAELNDWGRGKRCLAACKFVQKLATSQLLVNKGTTLPTFEVHDALEAWHELSTSIHTQA
KELKPLVLADAREWVSNRVNQQLSQRAEMGFDGMIQGLADALSGKGGDALAHRLRTQFPV
AMIDEFQDTDPAQYRIFDAIYQVQESDPSSALILIGDPKQAIYGFRGGDIYTYLKARAAT
SPRHHTLATNFRSSANVVASVNQLFRHAENAFTRKAFRFANETTQENPMPFTPAGANGRK
EALVLNSKPAAALTAWWVGEDDEPVNKKRYLAQAARHCANQIASWLNGAASNASGFENTT
GQAFRPLQASDIAILVRDRTEAAAIRSALSERQLASVYLSDRDSVFATPEAKDCWRWLKA
IAHPEEVSTLRAALATPTLGMSLAQLDELHHNELAWEATQERFAEYRARWHRQGVLPALR
QLMHDYRVPEQLLAKPQGERCLTNLLHLAEWAQQASDTLDGDHALIRVLGEHIQDPKRDE
QILRLESDADLIQVVTIFKSKGLEYPIVALPFIATFKEINGKWGTPLFHDEGGNAFLELA
NSKDEAKEGFEAANDERLSEDMRLLYVALTRARHATFIGLAPLKHGSSKKAQIDKSGIGH
LLGGGKVLPDLGSIKSAWQVHSEACAHITSHPATSEEVSYQVQATNSKLKTARTPSHQAF
TPWWIASYSALQQKGVNAPETPQAEIETEEHQPIRTTLIHGTPEVGSLHAFPKGPNPGTF
LHGVLETLANEGFDNASRDAELTQRMLQRCAQRGWEVHAPALKAGITAWLHTPLAAEGEE
GPVLASLTHYRAEPDFWFATVNAKTPVLDKLVKETLFPGEPRPALGFQQLNGLMKGFIDL
LAEHNGQYYVIDWKSNWLGPSDAAYTEDALTRATLDKRYDMQLCIYLLALHRHLRQTLPD
YDYDHHIGGAMLVFLRGIQAPSRGVLRVKPPLAFIERLDDLMAGENHKEVAV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctcccttccactgagtcgtcttctaccccattagccctgggccttcccctg
cgtggtagccaactcattgaagccagtgccggtacgggtaagacctttacgattgcgctc
ttgtacgtgcgcttggtactcggccacggacagcccgatgatgacagccattccttcact
aatggcttcacgatgccgctggtgccgccggatatcttggtcgtcacctttacagaagcc
gctagccaagagctgaaagaccgcatccgtgcccgcttggtgcaagccgcagaggcgttt
agggcaacagagggtgacgatggcttgcatcaaagcgaccccctgctggcgcagctgcgc
gacgattatcctcgcgcccattggccgctctgcgcccgcaggttagaagtggccgccgag
tggatggatgacgccgctatttctaccatccacagctgggcgcagcggatgctcaaggag
catgccttcgatagcgggaaactgtttcatcaagagatagtgaaagacctctcctcctta
acgcaggaggccgtatttgattattggcggacacgcatttaccccatggacgctcctatg
gcaggagtgatgatggagttattcgcatcgccaatagcgctacatggcgctttacgcact
ttattacagcgtcatgatgttcaactctgctttgcaggcgcgccgttacccaaaaaagac
ctgcaggcacagctacgggggctgcttcccgctcgtgaagcgctaaatgaggctgaagac
aaggcacggcaggcttattgccaggatgcagaagcgatacaccaagcgctgcatggcctt
cgcagcaagctcaatggcaataagtttcggggcaaaaacgatgacacaacgtttgccagc
tggttagcagagctcaacgactgggggcggggaaagcgttgcctggctgcgtgtaagttt
gttcaaaaactcgccaccagccagctgttagtgaataaaggcaccacgctacccaccttt
gaggttcatgatgcgttagaggcatggcatgagctgtccaccagtattcacactcaagcc
aaagaactgaagccgctggtactggccgacgcacgcgagtgggtctccaaccgagtaaac
caacagctctcacaacgtgctgagatggggtttgacggtatgatccagggtcttgctgat
gctcttagcggcaaaggcggcgatgcactcgcacacaggctacgcacgcagtttcccgtg
gcgatgatcgatgagttccaagataccgaccctgcgcaataccgtatttttgatgcgatc
tatcaggtgcaagagagcgacccctcgtcggcactgatcctgattggcgatcccaaacaa
gccatttacggctttcgcggtggcgatatctatacgtacttaaaggcgcgtgctgccaca
tctccacgtcatcacaccctggcaacgaacttccgttcaagcgcgaacgtagtggcctcg
gtaaatcaactttttcggcatgccgaaaatgcgtttactcgaaaagccttcaggtttgcc
aacgaaacaacccaagaaaaccccatgccgtttacaccggcaggcgcgaatggccgaaaa
gaagcgctagtgctgaatagcaagccggcagcggcgctaacagcgtggtgggtgggtgaa
gatgacgaaccggtgaataagaagcgctaccttgcgcaggccgcacgccactgcgcgaat
cagatcgccagctggcttaacggcgctgcctcaaacgcctcaggctttgaaaacactacc
ggccaagcgtttcgaccacttcaggcgagcgacattgctattttggtgcgcgaccgcaca
gaggcagctgctatccgttcggcattgagcgaacgtcagttagccagcgtgtatctatct
gaccgcgacagcgtatttgctaccccagaagcgaaagattgctggcgctggcttaaggct
attgcccatcctgaagaggtctcgacactacgcgcagcacttgccacgcccacgctgggg
atgagccttgctcaactggatgaacttcaccataacgagctcgcttgggaggcaacgcaa
gaacgttttgctgagtatcgcgcacgctggcatcgccagggcgtactgcctgctttacgt
cagctgatgcacgattatcgtgtgccagagcagctgctcgctaaaccccaaggggagcgc
tgcttaactaacctgttgcaccttgcggaatgggcccaacaggcgagcgataccttagac
ggtgaccatgcgctgattcgcgttctcggtgaacatattcaagacccaaaacgcgatgag
caaatcctgcgcctagaaagcgatgccgacctgatccaggtggtgaccatcttcaaatcg
aaaggactggagtacccgattgtcgccctgccctttatcgcgacgtttaaagaaattaac
gggaaatggggcacacctctgttccacgatgaaggcggcaacgcgtttttagagctagcc
aatagtaaagatgaggcgaaagagggctttgaagcggctaatgatgagcggctttctgaa
gatatgcgcctgctgtatgtcgcgctaacccgcgcgcgccacgcgacgtttatcgggtta
gcccccctgaaacatggtagtagcaaaaaagctcaaatcgataaatccggtattggccac
ttattaggtggtgggaaggtattgcccgacctggggtcgattaaaagcgcgtggcaggta
cactcagaagcctgcgctcatattacctcccatcccgccacgagcgaggaggttagctac
caagtacaggcgaccaactctaagttaaagaccgcacgaacaccgagccaccaagcgttc
accccatggtggattgccagctactcggctctgcagcaaaaaggtgtgaatgcccctgaa
acgcctcaggcagaaattgaaacggaagagcaccagccaatacgcaccacccttatccat
ggcacgcctgaagtgggctcgctgcatgcgtttcctaaaggccctaaccccggcaccttt
ttgcacggcgtattagaaacgctggcgaacgaaggttttgataacgctagccgtgatgca
gaacttactcagcgtatgctgcagcgctgcgctcaacggggttgggaagtacatgcacct
gccttaaaagccggtatcacggcgtggttacataccccactagcagcagaaggtgaggaa
ggcccggtgttggcatcgctcacccattaccgcgctgaacctgatttttggtttgccaca
gtaaatgccaagactccggtactcgataagctggtgaaggagacgctatttccaggtgag
ccacgtccagcactgggttttcaacagctcaacggtttgatgaaaggttttatcgaccta
ctcgcagagcacaacggccagtattacgtgattgattggaagtcgaactggctggggcct
tctgatgcggcttacaccgaggatgcacttactcgggcaaccttggataagcgctacgac
atgcagctgtgtatttacttgctggcactgcatcgccatctgcgccaaaccctgcccgac
tacgactatgaccaccatattggcggtgccatgctggtctttctgcggggcatacaagcg
cctagccggggcgttctgcgtgttaagccaccccttgcgtttattgagcgcctggatgac
ctgatggccggagaaaatcacaaggaggtggcggtatga
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