KEGG   Halomonas qinghailakensis: M0220_15905
Entry
M0220_15905       CDS       T10463                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hqn  Halomonas qinghailakensis
Pathway
hqn03030  DNA replication
hqn03430  Mismatch repair
hqn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hqn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M0220_15905
   03430 Mismatch repair
    M0220_15905
   03440 Homologous recombination
    M0220_15905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hqn03032]
    M0220_15905
   03400 DNA repair and recombination proteins [BR:hqn03400]
    M0220_15905
Enzymes [BR:hqn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     M0220_15905
DNA replication proteins [BR:hqn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     M0220_15905
DNA repair and recombination proteins [BR:hqn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     M0220_15905
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 PAS_4 Rv2179c-like MASE1 PAS
Other DBs
NCBI-ProteinID: UYO74338
UniProt: A0AA46TQH8
LinkDB
Position
complement(3502362..3504422)
AA seq 686 aa
MTRDGLPKRQRLIGLWLLLSGISLLGGAIFAAWLDAQLSPTGITRVALWLGSFSGGATIF
LVGLLLERMLFTPLRHLQVQLARLVANPDARDEHPPEGWLKGLGPDLRRVRESWRVDRNQ
LATAHADGARSAAKIRRELETLLQVLETPLLLCDHHRRLMLFNQAAEDFFVDNTALGLGK
RLEALLPVASLQQALSQLPADGSPRELLAPCDNRWLKVVLRRVPGSDGETLLTFSDATAS
WSNEMGVRAELATKLPLLRQHTASLTSAADALIQLRHNGSDNPTLRQRFEQVIQEESATL
GNNVGQIGQLLDDLQHQGERLTPMWSNDFWQALDERLDPAHRLITPVGMPAWFKGDAPAL
IVLFDSLVKHLNSHLPVSHFEGEICLGNKRVYLDLIWQGSPLPEHELAKWRRQPLPSLPL
NPLVSDVLRQHASDIWSLADDDAVHARLRLPLPAMDRVGAPRETAPPRPEFHDFGIADLP
PPDEELANRTLRSLEVVAFDTETTGLELRRGDTVISLGACRVVNARLLASEVFDQKVDPK
RPIPPNSTAIHGLTDADVAGAPPLDIVLTRFRDYVGEAVLLAHNAAFDMLAITNKGVVFD
LPVIDTLLISRALDEALDGHDLDTLAQRYDLTFPPGTRHTALGDARVTAELWLALLPRLE
ARGVDTLEQLLALQANAFDRQDASAS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgacccgtgacgggctccctaaacgtcagcgactcattggcctatggctgttactaagt
ggtatcagcctactggggggcgctatttttgctgcctggctggatgctcagctttcgcct
acgggcattacccgggtagcactctggctgggcagtttttccggcggtgcaacgatattt
ttagttggcctgctactagaacgcatgctgttcactcccctgcgtcatttacaggtacag
ctggccagattagtagctaacccagatgcccgtgatgagcacccgcccgagggttggctg
aaagggcttgggcctgacctgcgcagagtgcgtgaaagttggcgcgttgaccgcaaccaa
ctggctaccgctcacgcagatggtgcacgcagtgccgccaaaattcgtcgtgaattagaa
acgctactgcaagtactcgaaacccccttgttactatgtgaccaccatcgccgtttaatg
ctattcaatcaggctgcggaagactttttcgtcgataacacggcgttaggcttgggtaaa
cgcctagaagcgctactgcccgttgccagcctgcaacaagctcttagccagctaccagcg
gatggttcacctcgcgagctgcttgctccctgtgataaccgctggttaaaagttgtgtta
cgccgtgtgccaggcagtgacggcgaaacactgctaacgtttagcgatgcgactgcatcc
tggtcaaatgaaatgggggttagagcggaacttgctactaagctccccctcttacgccaa
catacggcaagcctaaccagcgctgcggatgcactgatacagctgcgccataatggctcg
gataaccctacattacgccagcggtttgaacaggtgattcaagaagagagtgccactctg
gggaataatgttggtcaaatcgggcagctattggacgatttacaacatcaaggtgaacgc
ctgacccccatgtggtcgaatgatttctggcaagctttagatgaacgcttagatccagca
caccggctaatcacccccgtcggtatgcctgcatggtttaaaggcgatgcaccggcactg
attgttctttttgattccttagtgaaacatcttaattctcatcttccggttagccatttt
gaaggtgaaatatgccttggtaacaagcgagtttatttggacttaatttggcaaggcagc
cccttaccagagcatgagctagcgaaatggcggcgtcagcctctgccgtcgctaccgctt
aatccgctggtatctgatgtgttgcgccaacatgccagcgatatttggagcctggctgac
gatgatgctgttcatgcgcgcctgcgtctgccgctaccagccatggatcgcgttggggca
ccacgagaaacagcacctccgcgcccagagttccatgacttcggcattgctgacctgcct
ccacccgatgaagaattggctaaccgcacgttacgtagtcttgaggtagttgcatttgat
accgaaaccaccggccttgagctgcgccgaggggatacggtgattagtctaggggcttgt
cgggtggttaacgcacgtctactagccagtgaagtctttgatcaaaaagtagatccaaaa
cgtcccatacctcctaacagtacggcgatacacggtttaactgatgctgatgtagccggt
gcaccgccccttgacattgttctaacgcgctttcgagattacgtcggtgaagcggttcta
ttagcgcataatgccgcgtttgatatgctcgccattactaacaagggggttgtatttgat
ctgcctgtcattgataccttattgatatcaagagcattagacgaagcattagatgggcat
gatttagatacgttggcccaacgatacgaccttacgtttccacctggcactcgccacacg
gcgcttggggacgcccgtgtaaccgctgaattatggctagcgttgttaccccggcttgaa
gcacgtggcgtggacacgttagagcagttgctagctctgcaggccaatgcatttgatcgc
caggatgccagcgcctcatga

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