Halomonas qinghailakensis: M0220_16260
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Entry
M0220_16260 CDS
T10463
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hqn Halomonas qinghailakensis
Pathway
hqn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M0220_16260 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hqn03400
]
M0220_16260 (uvrB)
DNA repair and recombination proteins [BR:
hqn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M0220_16260 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M0220_16260 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
UB2H
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UYO74400
UniProt:
A0AA46TPX8
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All DBs
Position
3574315..3576339
Genome browser
AA seq
674 aa
AA seq
DB search
MSKEFRLQSKFKPAGDQPAAIRSLISGLESGLAHQTLLGVTGSGKTFTMANVVQQQQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRAFLRRLAELQ
YTRNDMDFRRGTYRVRGDVIDIFPADSDEEAVRVELFDNEVDSIRLFDPLTGEVRTHVPR
MTIYPKSHYVTPRETILGAIDAIKSELKERLEWMRKHERLVEAQRLEQRTLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPDDALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMKFEEWESISPQTIFVSATPGKYEAEHASQIVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIGLRTAVGERVLVTTLTKRMAEDLTEYFDEHGIRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNAHGKAILYGDKITDSMRKAIDETERRRAKQTAHNEEHGITPTTVTRSVADILEAAQ
APGKKSSRRRGNDRKVAENTAEYDVATMSKHDLLGAISKLEDAMFEAAQNLEFEEAARLR
DQLHQMKEKQLALG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaattccggctgcagtccaaatttaagcctgctggtgatcagcccgccgcg
atacgcagcctgattagcgggcttgagtcggggcttgcccatcagaccttgttaggggtg
actggctcgggtaagacgttcacgatggcaaatgttgtgcagcagcagcagcgaccaacg
atcgtcatggctcccaataaaacgctagctgcccagctatatggcgagttcaaagcattt
ttcccggataacgcagtagagtactttgtctcttactatgactattatcagccagaagcc
tatgtcccttcttcagacacctttatcgagaaagacgcttctatcaatgaccatatcgag
caaatgcgcttatctgctacgaaagcgctgctggagcgtcgtgatgcgcttatcgttgtc
tcggtatcggcgatctatggtttaggtgatccggatcagtatcttaaaatgcggctgcat
tttacccgcggggagctgattgaccagcgtgcatttttacgccgcttagccgagctgcaa
tatacccgtaacgatatggatttccgccgaggtacctatcgggtacgtggcgatgtcatc
gatatttttcctgcggactctgacgaggaagcggtgagggtcgaattgtttgacaatgaa
gttgattctattcgcctatttgaccccttaaccggcgaggtgcgtacccacgtgcctcgc
atgactatctatccaaaatcacactatgtcacaccgcgagaaactattttaggcgcgatt
gatgcgattaaatcagagcttaaagagcgtcttgagtggatgcgcaaacatgagcgttta
gttgaagcgcagcgattagaacagcgcactctctacgatatcgaaatgatgctagaactc
ggctactgcaacggtattgaaaactactcacgctatctttcaggccgcgcgcctggcgag
ccacccccgacgttcttcgactatctgccggatgacgcgttgctgtttattgatgagtct
catgtaagcgtaccccaggttggcggtatgtataagggcgaccgttctagaaaagagacc
ctggttgaatatggctttcggctaccctcagcgctagataaccgcccaatgaaatttgaa
gagtgggaatctatttcgccacaaaccatctttgtgtcggcaacaccaggcaagtatgaa
gccgagcatgccagtcaaattgttgaacaggtggtgcgtccaacggggttgttagacccg
gaaatagaggttcgccctgccagcacccaggttgatgacctgctctcagaaattggctta
cgtaccgctgttggtgagcgtgttcttgtaactacgctgaccaagcgcatggcagaagat
ctgaccgagtactttgatgagcacggtatccgcgtgcgttatttgcactcggatattgat
accgttgagcgtgtagaaatcattcgcgatctgcgtcttggtaagttcgatgtattagtc
ggcattaacttacttcgagaaggcttggatattcctgaagtgtcgctggttgccatctta
gatgcggataaagagggctttttacgcgctgagcgctcactgattcaaaccattggccgt
gcagcacgtaacgctcatggtaaagctattttatacggtgacaaaatcactgattcaatg
cgaaaggcaattgatgaaaccgagcgtcgccgtgccaagcagaccgctcataatgaagag
catggtattaccccaacgacggtgacacgctcggtagcggatattcttgaagccgcccaa
gcaccgggcaaaaagagtagtcgccggcgtggcaacgaccggaaagtagctgaaaatacg
gctgagtatgatgttgccacgatgagcaagcatgatttgctgggcgctattagtaagtta
gaggatgccatgttcgaggctgctcaaaatttggagtttgaagaagcagcgaggcttcgt
gatcagcttcatcagatgaaagaaaaacagctggcgctaggataa
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