Halomonas qinghailakensis: M0220_16695
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Entry
M0220_16695 CDS
T10463
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hqn Halomonas qinghailakensis
Pathway
hqn03030
DNA replication
hqn03430
Mismatch repair
hqn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hqn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M0220_16695
03430 Mismatch repair
M0220_16695
03440 Homologous recombination
M0220_16695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hqn03032
]
M0220_16695
03400 DNA repair and recombination proteins [BR:
hqn03400
]
M0220_16695
Enzymes [BR:
hqn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M0220_16695
DNA replication proteins [BR:
hqn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M0220_16695
DNA repair and recombination proteins [BR:
hqn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M0220_16695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DNA_pol_A_exo1
SprT-like
Motif
Other DBs
NCBI-ProteinID:
UYO74480
UniProt:
A0AA46YQH3
LinkDB
All DBs
Position
3668309..3669694
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AA seq
461 aa
AA seq
DB search
MRNMPLIFIDIETTGTRATRDRITEIAAFKVVDGHITDRWVSLINPGTSVPSHICQLTGI
YDDMLIDAPSFYTIAPSLREWLGEDCLVAHNARFDASFLRNEFKRVGINYQPQLRCTLRI
SRRLMPELPKHNLRSLLAHFNIHQARQHRAEDDATALWQLWKVWQQQFDAASWQAALADE
QRHRSLPAHLASEQLTGLPASPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHQDDKE
MRLVQQIQHIEWEETAGDLSAQLREAELVKELMPIMNRQLRRQGHLKTWYWPTDQPCPTL
VSGKAISQPQSGKLFGLFRSAKEAKAALRSIAETHQLCPQVLRIDKGTGRCFANQLGKCR
GACCGQEPLESHSQRAQEALASFQVNTWPWPGRIIIREKSRKNGPTSHHVIDHWCYLGSA
TTKQRALGLKGVAAKFDVDTYRILNRFLREPERHNLTISPL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatgccgctgatttttattgatatcgagacaacaggcactcgtgcgacgagg
gatcgaataaccgaaattgcggccttcaaggtagtggacggtcacataacggatcgctgg
gtcagcctgattaatcctggcactagcgtgccctctcacatctgccaactcaccggcatt
tatgatgacatgctaattgatgcaccctcgttttataccattgctcccagcttgcgcgaa
tggcttggtgaagattgcttggtagcccacaatgcgcgatttgacgccagctttttgcgc
aacgaattcaaacgtgtcggtatcaactaccagccgcagctgcgctgcacactgcgcatt
tcccgccgtttaatgcctgaactgcctaagcacaatctccgaagcttattggctcacttc
aatattcatcaagcccgccagcaccgagcagaggatgatgccactgccctttggcagctg
tggaaagtctggcagcagcaatttgacgctgccagttggcaagccgcccttgctgatgaa
caacgccaccgcagcctacccgcccacttagccagcgaacagctaactgggctgcctgcc
tcgcctggggtttatttgttttatggccacaaccgccttccgctgtacgttggcaaaagc
attaatttacgcagccgagttcttggccatttccaacgcgaccaccaagacgacaaagaa
atgcgccttgtccagcaaatacagcatattgaatgggaggaaaccgctggcgacttaagc
gcccagctaagagaagctgaactggttaaagagctgatgccgattatgaatcgccaactg
cgccgtcaggggcatttaaaaacatggtactggccaactgaccaaccttgcccaacgctg
gtcagcggcaaggcgatcagccagcctcagtcgggaaagctgtttgggctgtttcgcagc
gccaaagaagctaaagctgcgctacgcagtattgccgaaacacatcagctttgcccgcaa
gtgctaagaatagataaaggaacaggacggtgttttgctaaccagttaggcaaatgtaga
ggcgcctgctgtggacaggagccccttgaaagccactcacagcgcgcccaagaagcacta
gcatcttttcaagtcaacacatggccttggccaggccgcattattattcgcgagaaaagc
cgtaaaaacggcccaaccagccatcatgtaatcgaccactggtgctatttaggcagcgcc
acaaccaaacagcgtgcccttgggctaaaaggcgtcgctgccaaatttgatgtagatacc
tatcgcattctaaaccgctttttacgtgaaccagagcgacacaacctgacaatatcgccg
ctctaa
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