Haloplanus rallus: EI982_06545
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Entry
EI982_06545 CDS
T06334
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hra
Haloplanus rallus
Pathway
hra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EI982_06545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hra03021
]
EI982_06545
Transcription machinery [BR:
hra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
EI982_06545
Prokaryotic type
Archaeal type
TFB
EI982_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_3
Zn_ribbon_RRN7
Trm112p
DUF7559
DZR_2
Auto_anti-p27
Zn_ribbon_tTFIIB
Zn_ribbon_FGT1_2
DUF5817
Motif
Other DBs
NCBI-ProteinID:
QGX94468
UniProt:
A0A6B9F2L2
LinkDB
All DBs
Position
complement(1015451..1016443)
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AA seq
330 aa
AA seq
DB search
MSHQPHSLREAGGEQHETTDVETEERVDEFACPECDAALVADEAHGETVCESCGLVVEED
EIDHGPEWRAFDSNERAEKSRVGAPTTKLLHDDGLSSVIDWQDRDAKGRTIDGSKRRKLQ
RLRTWDERFRSKSAQERNLKQALGEIDRMSSALGLPENVRETASVVYRRALEDDLLRGRS
IEAMATASLYAAARQASVPRSLDEFEPVSRVERKEFSRAYRYIVRELGLAIEPANPLEYL
PRFASDLDLDGETKTRARSLLEEGMESGVHSGKSPVGLAAAALYAASILEGEKVTQKEVC
SVSDVSEVTVRNRYTELLEAGTDPDAARAA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccagccccactccctccgagaggccggcggggaacagcacgagacgaccgac
gtcgagaccgaagaacgcgtcgacgagttcgcctgtccggagtgtgacgcggcgctcgtc
gccgacgaggcacacggcgagacggtgtgtgagtcctgcggtctcgtggtcgaggaagac
gagatcgaccacgggccggagtggcgtgccttcgactccaacgagcgagcggagaagagc
cgtgtcggcgcaccgacgacgaaactcctccacgacgacggtctctcctcggtcatcgac
tggcaggaccgggacgcgaaggggcggaccatcgacgggagtaagcgtcgcaagctacag
cgactccggacttgggacgagcggttccgttcgaagagcgcccaggagcgcaacctgaag
caggcgctcggcgagatcgaccggatgtcgtcggcgctggggttgcccgagaacgtccgc
gagaccgcgagcgtcgtctaccgccgcgcgctcgaggacgacctgctccgcggtcgctcc
atcgaggcgatggcgacggcgtcgctgtacgccgccgcccgccaggcctcggttccgcgg
agtctcgacgagttcgaacccgtcagccgggtcgagcgcaaggagttctctcgagcctac
cgctacatcgtccgcgaactcggcctcgccatcgaacccgccaaccccctcgaatacctc
ccgcgctttgcctccgatctcgacctcgacggcgagacgaagacgcgtgcacgttcgctc
ctcgaggaaggcatggagagcggcgtccacagcggcaagagcccggtcggcctcgcggcg
gccgcgctctacgccgcctccatcctcgaaggggagaaagtgacccagaaggaggtgtgt
tcggtgagcgacgtctcggaggtgacggtccgcaaccggtacaccgaactgctggaagcc
ggcaccgaccccgatgcggcccgcgccgcctag
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