Haloplanus rallus: EI982_07600
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Entry
EI982_07600 CDS
T06334
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
hra
Haloplanus rallus
Pathway
hra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EI982_07600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hra03021
]
EI982_07600
03019 Messenger RNA biogenesis [BR:
hra03019
]
EI982_07600
Transcription machinery [BR:
hra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
EI982_07600
RNA polymerase I system
EI982_07600
Messenger RNA biogenesis [BR:
hra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
EI982_07600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Ribosomal_uL24m-like
KOW4_SPT5
KOW2_Spt5
SH3_KIN17_C
Motif
Other DBs
NCBI-ProteinID:
QGX94666
UniProt:
A0A6B9F2S1
LinkDB
All DBs
Position
complement(1211124..1211561)
Genome browser
AA seq
145 aa
AA seq
DB search
MGIFAVKTTASQERTVADMIASREEDEVHAVLAPDSLTSYVMVEADNSAVLERVMDEIPH
ARSIVPGTSSLTEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKARVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcttcgccgtcaagaccaccgcgagccaggagcgcacggtcgcggacatgatc
gccagccgcgaggaggacgaggtgcacgcggtgttggcacccgactccctgacgagttac
gtgatggtcgaggcggacaacagcgccgtcctcgaacgcgtcatggacgagattccccac
gcccgatcgatcgttcccggcacctcctcgctcaccgaggtggaacatttcctctcgccc
accccggacgtcgagggcatcgccgagggcgacatcgtcgaactcatcgccggcccgttc
aaaggcgagaaggcccgcgtccagcggatcgacgagggcaaggaccaggtgaccgtcgaa
ctgtacgaggcgacggtgcccatccccgtcaccgtccgcggcgaccagatccgcgtcctc
gactcggacgaacggtaa
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