Haloplanus rallus: EI982_09015
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Entry
EI982_09015 CDS
T06334
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hra
Haloplanus rallus
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hra03032
]
EI982_09015
03400 DNA repair and recombination proteins [BR:
hra03400
]
EI982_09015
Enzymes [BR:
hra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EI982_09015
DNA replication proteins [BR:
hra03032
]
Prokaryotic type
DNA Topoisomerases
EI982_09015
DNA repair and recombination proteins [BR:
hra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EI982_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
HHH
DUF4332
DNA_primase_lrg
DNA_pol_lambd_f
DUF7340
HHH_8
HEXIM
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
QGX94918
UniProt:
A0A6B9F3P7
LinkDB
All DBs
Position
complement(1499490..1502006)
Genome browser
AA seq
838 aa
AA seq
DB search
MKRGPELIVTEKDNAARRIADILSDGSAESDRVNGVNVYKWGGKRCIGLSGHVVGVDFPP
EYGDWRDVEPVELVSADVEKRPTQENIVAALRRLARDASRIHIATDYDREGELIGKEAYE
LVREVNEAAPVDRVRFSSITDREVQEAFADPDDLDFDLAAAGEARQIIDLMWGASLTRFL
SLSARQLGDDFISVGRVQGPTLKLIVDREREIDAFDSEDYWELFAALTKDSETFEAQYFY
LDADDNEAERVWEEARADAVDRTLSAASTATVDEVRRRTRTDDPPAPFNTTQFIRAASGI
DYSAQRAMSIAEDLYTAGYVTYPRTDNTVYPEDLEPRALLDALSDGPRFGDDAADLLDAD
EITPTAGDEETTDHPPIHPTDELPSPSDLSEDEWVVYELVVRRFLATVADAATWEHLRVV
AAVDGDDEDLRLKANGKRLVDPGYHAVYPYRSTTENYVPDVAEGEELAVTEARLEAKQTQ
PPRRYGQSRLIETMEDMGIGTKATRHDVIQKLYDRGYIEGDPPRPTRLARGVVEASEEFA
DRIVSEEMTARLEEDMQAIARGEADLDEVTDESREILERVFDRLEDSREALGDHLRESLK
ADKTVGPCPECGADLVIRRSRGGSYFVGCDGYPDCEYTLPLPSTGKPILLDDVCGEHGLH
DVKMLAGRKTFVHGCPLCAAEAADEEPDLIVGPCPECGADHDGELAVKRLRSGGRLVGCT
RYPDCEYSLPMPRRGEVERVEETCEEHGLPGLRITYEDADREPWDLGCPICNYREYQARQ
AGTELEAIDGIGEKTAEKLKAAGVEDVAGLKAAEPDALADEIDGVGEDTVRNWQADAD
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcggccccgagttgatcgtcacggagaaggacaacgccgcccgtcgcatcgcg
gacatcctgagcgacgggagcgcggagagcgaccgcgtcaacggcgtcaacgtctacaag
tggggtggcaagcgctgtatcggcctgtcggggcacgtcgtcggcgtcgacttcccgccg
gagtacggcgactggcgcgacgtcgagccggtcgaactcgtgagcgcggacgtcgagaaa
cggccgacccaggagaacatcgtcgcggcgctccggcggctggcacgcgacgcctcgcgg
atccacatcgcgaccgactacgaccgcgagggcgaactcatcgggaaggaggcgtacgaa
ctcgtccgcgaggtcaacgaggcggcgccagtcgatcgggtgcggttctcctcgatcacc
gaccgcgaggtgcaggaggcgttcgccgaccccgacgacctcgatttcgacctcgcggcc
gcgggcgaggcccggcagatcatcgatctgatgtggggcgcctcgctcacgcgctttctc
tccctgtcggcccggcaactcggcgacgacttcatctccgtcggccgggtccagggtccg
acgctgaagctgatcgtcgatcgggaacgcgagatcgacgccttcgattccgaggactac
tgggaactgttcgccgccctcacgaaggactcggagaccttcgaggcgcagtacttctac
ctcgatgcggacgacaacgaggccgagcgcgtctgggaagaggcgcgggccgacgcggtc
gaccggaccctgtcggcggcgtcgacggcgaccgtcgacgaggtgcgccggcgcacccgg
accgacgatccgccggcgccgttcaacacgacgcagttcatccgcgccgcgagcgggatc
gactactccgcccagcgcgcgatgagcatcgccgaggacctctacaccgcgggctacgtc
acctacccccggacggacaacacggtctatcccgaagacttggagccgcgggccctgctc
gacgcgctgtcggacggcccccggttcggcgacgacgccgccgacctgctcgacgccgac
gagatcacgcccacggccggcgacgaggagacgaccgaccatccgccgatccacccgacc
gacgaactcccctcgccctcggacctctcggaggacgagtgggtggtgtacgaactcgtc
gtccgccgcttcctggccaccgtcgcggacgcggcgacctgggaacacctgcgcgtcgtc
gcggccgtcgacggcgacgacgaggacctccgcctgaaagccaacggcaagcgcctcgtc
gatccgggctaccacgccgtctatccctaccgctcgacgacggagaactacgtccccgac
gtcgccgagggggaggaactcgcggtgaccgaggcgcgcctcgaagccaagcagacccag
ccgccgcgccggtacgggcagtcccgactcatcgagaccatggaggacatgggcatcggg
acgaaggcgacgcgacacgacgtgatccagaagctgtacgaccgggggtacatcgagggc
gatccgccccggccgacccggctagcccgaggggtcgtcgaggcctccgaggagttcgcc
gaccgcatcgtcagcgaggagatgaccgcccgactggaggaggacatgcaggccatcgcc
cgcggcgaggccgacctggacgaggtgaccgacgagtcgcgggagatcctcgaacgcgtg
ttcgaccgcctcgaggactcccgggaggcgctcggcgatcacctccgcgagtcgctgaag
gccgacaagaccgtcgggccgtgtccggagtgtggcgcggacctcgtgatccggcggagc
cgcgggggctcctatttcgtcggctgtgacggctaccccgactgcgagtatacgctcccg
ctcccctcgacgggcaagcccatcctcctcgacgacgtctgcggggagcacggcctccac
gacgtgaagatgctcgccgggcggaagacgttcgtccacggctgtccgctgtgtgcggcc
gaggccgccgacgaggaacccgacctgatcgtcgggccgtgtccggagtgtggcgcggac
cacgacggcgaactcgcggtcaagcgcctccgctccggcggccgactcgtcggctgtacg
cgctaccccgactgcgagtactccctcccgatgcctcgccgtggcgaggtcgaacgcgtc
gaggagacctgcgaggaacacggcctcccgggcctgcggattacctacgaggatgctgac
cgcgagccgtgggatctgggctgtccgatctgtaactaccgggagtaccaggcccggcag
gcggggacggaactggaggccatcgacggcatcggcgagaagaccgccgagaagctgaag
gccgcgggcgtcgaggacgtcgccggcctgaaggccgccgaaccggacgcgctggccgac
gagatcgacggcgtcggcgaggataccgtacgaaactggcaggccgacgcggactga
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