Haloplanus rallus: EI982_11310
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Entry
EI982_11310 CDS
T06334
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hra
Haloplanus rallus
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hra03016
]
EI982_11310 (truD)
Enzymes [BR:
hra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EI982_11310 (truD)
Transfer RNA biogenesis [BR:
hra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EI982_11310 (truD)
Prokaryotic type
EI982_11310 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QGX95344
UniProt:
A0A6B9FA39
LinkDB
All DBs
Position
1925779..1927113
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AA seq
444 aa
AA seq
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MREAHPLERQVGIDYYVSDGPGVGGRLRADPADFRVRELEAVDPEPPDADAGAYPHLLVR
ATLVDWDTNDFAGALSDALGVSRERVSWAGTKDKRAVTTQLFSVQGIDAADLPTLDGVDL
EPLGRVGRNLEFGDLAGNAFEIRVSEPERPEAVDDVGDALTAFGGGRPAVPNVFGHQRFG
SRRPVTHEVGLHVVREEWRAAVLAYVGNPAETEPERTRTARATVEEVAAGDDPDWAAALD
AMPGHLGYERSMLHRLVENGGREPADFRNALEAVPWNLQRLFVNAAQSFAFNRIVSERLR
RGLPFDRPVAGDVVAFADADAPADLAVPDTDRLQRVTEERVDVVTRHCERGRAFVTAPLV
GTETELGDGEPGDVEREVLDGLDLSPSDFDLPGNFDSSGTRRAVLVGTDLSVERDPLTLS
FSLPRGSYATAVLREFLKVDPRDL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaggcacacccgctcgaacggcaggtcggcatcgactactacgtgagcgacggc
cccggggtcggcggccgactccgggccgaccccgccgacttccgggtccgggagctcgaa
gccgtcgaccccgagccgcccgacgccgacgccggagcctacccccacctgttggtgcgg
gcgacgctcgtcgactgggacaccaacgacttcgcgggcgcgctctcggatgcgttgggc
gtgagccgcgagcgggtgtcgtgggccggcaccaaggacaagcgcgcggtcaccacgcag
ctgttctccgtccaagggatcgacgccgcggatctgccgaccctcgacggcgtcgacctg
gagccgctggggcgggtggggcgaaacctagagttcggcgacctcgccggcaacgccttc
gagatccgggtgagcgaaccggagcgcccggaggcggtcgacgacgtgggcgacgcgctg
acggccttcggcggcgggcggcccgcggtgccgaacgtcttcggccaccagcggttcggg
agccggcgccccgtcacccacgaggtcggactgcacgtcgtccgggaggagtggcgggcg
gcggtcctggcctacgtcggcaacccggccgagacggagccggagcggacgcggacggca
cgggcgacggtcgaggaagtcgccgccggcgacgaccccgactgggcggcggcgctcgac
gcgatgcccggccacttggggtacgagcggtcgatgctccaccggctggtcgagaacggc
ggccgcgagccggcggacttccggaacgcgctggaggccgtcccctggaacctccagcgc
ctgttcgtcaacgccgcccagtcgttcgctttcaaccggatcgtctccgagcgcctgcgt
cgcggcctgcccttcgaccgcccggtcgccggggacgtggtggcgttcgcggacgcggac
gcgccggcggacctcgccgtccccgacaccgaccgcctccagcgggtgaccgaggagcgc
gtcgacgtcgtgacccggcactgcgagcggggacgggccttcgtcaccgcgccgctggtc
ggcaccgaaacggagctgggcgacggcgaacccggcgacgtcgaacgcgaggtgctcgac
ggcctcgacctgtcgccgtccgacttcgacctgcccggcaacttcgactcctcgggcacc
cggcgggcggtcctcgtcggcaccgacctctcggtcgagcgcgacccgctcaccctctcg
ttctcgctgccacgagggtcgtacgccaccgccgtcctccgggagttcctgaaggtcgat
ccgcgggacctctag
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