Haloplanus rallus: EI982_11910
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Entry
EI982_11910 CDS
T06334
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hra
Haloplanus rallus
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hra03016
]
EI982_11910 (endA)
Enzymes [BR:
hra01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
EI982_11910 (endA)
Transfer RNA biogenesis [BR:
hra03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
EI982_11910 (endA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
QGX95441
UniProt:
A0A6B9FAS8
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All DBs
Position
complement(2045117..2046154)
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AA seq
345 aa
AA seq
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MQGTFEDGVVRVGGDARQRFYDARGYGRPLSGNRIELAPVEAAHLLFRGDLDAVVDGDDR
LDFRSFLVATDAALAFVVYKDLRDRGFYLSPARDGWVDHPDGADFVVFPRGSGPEDDAVA
YRLRVAGERESIPAASLGDVTLAVVDEEGELTYLETARPDAAGEADGGERYDPPTGLDAA
LLADRAVVWEPPEALHDRGFYGQRLLGRNAETGPLQLSLVEAAYLARRGTLDLAEPHVVE
RGRAVEGERFDRRLRAYAALRAAGSVPKSGFKFGADFRTYDAFTTVEEMDHSARLIRVVA
PDHTFLPRDLSLDVRLAGGVRKRMVFALTDVNEGIDWLSVARLTP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggaccttcgaggacggcgtcgtccgcgtcggcggcgacgccagacagcggttc
tacgacgcccgcggctacgggcggccgctctcgggcaaccggatcgaactcgcgcccgtc
gaagccgcacacctcctctttcggggcgacctcgacgccgtcgtcgacggcgacgaccgc
ctcgacttccggtccttcctcgtcgccaccgacgccgccctcgccttcgtcgtgtacaag
gacctgcgcgaccgggggttctacctctcgcccgcccgcgacggctgggtcgatcacccg
gatggcgccgacttcgtcgtcttcccccgcgggagcggccccgaggacgacgccgtcgcg
taccggcttcgcgtcgccggcgagcgcgagtccatccccgccgccagcctcggcgacgtg
accctcgccgtcgtcgacgaggagggagagctcacgtatctggagacggcgcggccggac
gcggccggcgaggcggacggcggcgagcggtacgacccgccgaccggcctcgacgccgcc
ctcctcgccgaccgggcggtggtgtgggagccgcccgaggcgctccacgaccgggggttc
tacggccagcgactcctcggacggaacgccgagacgggacccctccagctgtcgctcgtg
gaggcggcgtacctcgctcgccgcggcaccctcgacctggccgaaccccacgtcgtcgag
cgcggccgggccgtcgagggcgagcggttcgaccgccggctccgcgcctacgcggcgctc
cgggcggcggggagcgtcccgaagagcgggttcaagttcggcgccgacttccgcacctac
gacgccttcaccaccgtcgaggagatggaccactcggcgcgtttgatccgcgtcgtcgcg
cccgatcacaccttcctgccccgcgacctctcgctcgacgtccggctcgccggtggggtc
cggaagcgaatggtttttgcgctgaccgacgtgaacgaggggatagactggctctccgtc
gcccgactcacgccctaa
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