Haloplanus rallus: EI982_12630
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Entry
EI982_12630 CDS
T06334
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hra
Haloplanus rallus
Pathway
hra03022
Basal transcription factors
hra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EI982_12630
09124 Replication and repair
03420 Nucleotide excision repair
EI982_12630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hra03021
]
EI982_12630
03036 Chromosome and associated proteins [BR:
hra03036
]
EI982_12630
03400 DNA repair and recombination proteins [BR:
hra03400
]
EI982_12630
Enzymes [BR:
hra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EI982_12630
Transcription machinery [BR:
hra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EI982_12630
Chromosome and associated proteins [BR:
hra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EI982_12630
DNA repair and recombination proteins [BR:
hra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EI982_12630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_22
SLFN-g3_helicase
AAA_16
Zot
AAA_30
AAA_25
nSTAND3
GvpD_P-loop
HBB
Dabb
AAA_19
AAA_5
DUF815
AAA_11
SecA_DEAD
PhoH
AAA_34
TPR_MLP1_2
Motif
Other DBs
NCBI-ProteinID:
QGX95577
UniProt:
A0A6B9FA96
LinkDB
All DBs
Position
complement(2186840..2189002)
Genome browser
AA seq
720 aa
AA seq
DB search
MADTAGHERFFPYESPYPNQREAMDRIANSLARGQDVLLEGAPGTGKTLSALVPALAHAR
DEDRTVVITTNVHQQMRQFVEDARAIASEEPIRAVVFKGKGSMCHLDVGYEECRSLKETT
RSLVEAEADRRELAERSEALLDDVRAGEEAAAEARAAVVDELEAIEEEIEELESANVCEH
YRANLTRDTEAFEDWLFEDVRTPEEIYAYADERGLCGYELLKEGMEGVDLAVCNYHHLLD
PTIREHFFRWLGRDPSEVVTVFDEAHNVESAARDHATRTLSARTLEGALAELDEADDSRA
GRARNVIEAFLTGLESAVDDALGFGEREQVGENWHDLDVANDDRRDDLTLAFLDAYEGGG
IDTEIDLALQVGEALDEAYEEAYRRGETTTRQESPTLQAAGFVADWMAEGTDLGRHPMAA
VRRDAGTDEVYGRAELYTAIPRRVTEDLFDEVAASVLMSATLRPFDVLADVLGLSDPATL
TYGLAYPEERRRTFAVEGPALFASDREDPETQATVAETLANVIRMTPGNTLCFFPSYAEA
ERYHDLLGASDAYLDEAGTPTEDLRRRFVAEDGAALFTSLWGTLGEGVSFDGDDARAVVV
VGVPYPNLSKRLEAVQDAYDRVYDDRLDAGWRYAVEIPTIRKTRQALGRVIRSPDDYGVR
VLLDKRYTRAGRDMGKYGVRDSFPPEERDELIDVATEKVEFAILNFFADLDAYDGDPPAP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacacggcgggacacgagcggttctttccgtacgagtcgccgtacccgaaccag
cgcgaggcgatggaccgcatcgccaactcgctcgcccgcggccaggacgtgttgctggag
ggcgcccccggcaccggcaagacgctgtcggccctggtgcccgcgctcgcacacgcccgc
gacgaggaccggacggtcgtcatcacgacgaacgtccaccagcagatgcgccagttcgtg
gaggacgcccgcgccatcgcgagcgaggagccgatccgggcggtcgtcttcaagggcaag
ggctcgatgtgtcacctcgacgtcgggtacgaggagtgccggagcctcaaggagaccacg
cgttcgctggtcgaggccgaggcggaccgccgggaactcgccgagcggagcgaggcgctc
ctcgacgacgtgcgcgcgggcgaggaggcggccgccgaggcccgggcggccgtcgtcgac
gaactcgaagcgatcgaggaggagatcgaggagttggagtccgcgaacgtctgtgagcac
taccgcgcgaacctgacccgggacacggaggccttcgaagactggctgttcgaagacgtc
cgcaccccggaggagatctacgcctacgccgacgagcgggggctctgtggctacgaactc
ctcaaggaggggatggagggggtcgacctcgcggtctgtaactaccaccacctcctcgat
ccgaccatccgcgaacacttcttccggtggctgggccgcgatccctcggaggtcgtcacc
gtcttcgacgaggcacacaacgtcgagtcggcggcccgcgatcacgcgacgcggacgctc
tcggcccggaccctggagggcgcgctggctgaactcgacgaggccgacgactcgcgggcg
ggacgcgctcgcaacgtgatcgaggcgttcctgacggggctggagtcggccgtcgacgac
gcgctggggttcggcgagcgcgaacaggtcggggagaactggcacgacctggacgtcgcc
aacgacgaccgccgcgacgatctcacgctcgccttcctcgacgcctacgaggggggcgga
atcgacaccgagatcgacctcgcgttgcaggtcggggaggcgctcgacgaggcctacgag
gaggcctaccggcgcggcgagacgacgacccgacaggagtcgccgacgctccaggcggcc
ggcttcgtcgccgactggatggccgaggggaccgacctcggccgccacccgatggccgcg
gtgcggcgcgacgcgggcaccgacgaggtgtacggccgagcggagctctacaccgcgatc
ccgcggcgagtgaccgaggacctgttcgacgaggtggccgcgagcgtgctgatgagcgcg
acgctccgcccgttcgacgtgctcgcggacgtcctcggcctgtcggaccccgcaacgctc
acctacgggctggcgtaccccgaggagcgccggcggacgttcgccgtcgaggggccggcg
ctgttcgccagcgatcgggaggaccccgagacccaggcgaccgtcgcggagacgctcgcc
aacgtgatccggatgacgcccgggaacacgctctgcttttttccctcctacgccgaggcc
gagcggtatcacgacctgctcggcgcgtcggacgcttacctcgacgaagcggggacgccc
acggaggacctccgccgacggttcgtcgccgaggacggcgcggccctgttcacgtcgctg
tggggcaccctcggcgagggggtgagcttcgacggcgacgacgcccgagccgtcgtcgtc
gtcggcgtgccgtatccgaacctctcgaagcgactggaggcggtacaggacgcgtacgac
cgggtctacgacgaccgcctcgacgcggggtggcgctacgccgtcgagatcccgacgatc
cgcaagaccagacaggcgctcgggcgggtcatccgctcgcccgacgactacggggtgcgg
gtcctcctcgataagcgctacacgcgcgccggccgggatatggggaaatacggcgtccgc
gactcgttcccgccggaggagcgcgacgaactcatcgacgtggcgaccgagaaagtcgag
ttcgcgatcctgaacttcttcgccgacctcgacgcctacgacggcgacccgccggcgccg
tga
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