KEGG   Herbaspirillum rubrisubalbicans: Hrubri_0028
Entry
Hrubri_0028       CDS       T04238                                 
Name
(GenBank) restriction modification system DNA specificity subunit
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
hrb  Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hrb02048]
    Hrubri_0028
Enzymes [BR:hrb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Hrubri_0028
Prokaryotic defense system [BR:hrb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Hrubri_0028
SSDB
Motif
Pfam: Methylase_S
Other DBs
NCBI-ProteinID: ALU87262
LinkDB
Position
32821..34125
AA seq 434 aa
MLPKEWKQVPLHTVAEVRTGLSKNAQRAGATLKRPYLRVANVQDGALDLSDVHEIEVPAS
QTSRYTLQAGDLLLIEGNGNPENLGRGCLWHGQIPDAVHQNHVFAVRTHKNGPLLPAFLE
LQIQSKYGRNYFLSCAKGSTGLSSLNSTQLKSFPVILPPFEEQLRIARVIQTWSGAIAAA
EKLLANSYKQKQAVIGCFLMPVPLSNAKRTVGAAFPSSVQPGIPQLPPAPKGWFKTTLGT
HLKEVIRPVSLDPTQNYRLVTVRRSRGGVDERCKLPGAEIKTPTQFYVHEGDFLISKRQI
VHGACGIVPPELDGAIVSNEYAVLNTYGDLDPRFLRYLSETTYFQQTCFHSSIGVHIEKM
LFRLDKWLKWPINLPPLGEQLRIVAILDAASQEETTIQKQLDLLREEKRALMADLLTGKR
RVRMPDTTAEPEAA
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgctgcctaaggagtggaaacaggtaccgctgcataccgtcgcagaagttcgcacagga
ctgtcaaaaaacgcacagcgtgcgggtgcgactctgaagcggccctatcttagagtcgca
aacgttcaagacggtgctttggacttgtcggacgttcacgagattgaggtgccagctagt
caaacgtcgcgctacactctgcaagcaggggacctgctgctgatcgaaggcaatggaaat
cctgaaaatctcggacgtggttgcttatggcacggccagatccccgacgccgttcaccag
aatcatgtattcgctgtgcgaacacataagaatggaccgttgctacctgcgttcttggag
ttgcagatccaatctaaatatggccgcaactatttcttgtcttgtgccaaaggatcaact
ggtctttcgtcgctgaactctactcagctaaagagcttcccggtaatacttcctccattt
gaagagcagcttcgtattgcgcgtgttattcaaacatggagcggtgctattgccgctgca
gagaaactccttgccaatagctacaagcagaagcaggcggtgatcggctgtttcctgatg
ccagtccctcttagcaatgcaaagcgtacggtgggagcagcctttccatcctccgttcag
cctggtattcctcaattaccgccagcaccgaagggctggttcaagaccacactggggact
catctgaaggaagtcattcgtcctgtaagccttgatccaacccaaaactatcggctggtc
accgtgcggcggtcgcgtggaggcgtcgatgaacgatgcaaattgccaggggcggaaatc
aagacgcccacgcagttttatgtccacgaaggagactttcttatctccaagcgtcagatc
gttcatggcgcatgcggcatcgttccgccagaactggacggtgccatcgtctccaatgag
tacgctgttctgaacacgtacggcgatcttgatccgcgcttcttgcgctacctgtctgaa
accacctatttccagcaaacctgctttcactccagcattggcgtgcatatcgagaagatg
ctgttccgcctcgataaatggttgaaatggcccatcaatttgccgcctttgggtgagcag
cttcgcatcgtggccatccttgatgctgctagccaagaggagacgacgattcagaaacag
ttggatttacttagggaagaaaaacgcgccctcatggccgacctgctaaccggcaaacgt
cgcgttcgtatgcccgacacgacggcagaaccggaggccgcatga

DBGET integrated database retrieval system