Herbaspirillum rubrisubalbicans: Hrubri_0134
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Entry
Hrubri_0134 CDS
T04238
Symbol
rpsC
Name
(GenBank) 30S ribosomal subunit S3 protein
KO
K02982
small subunit ribosomal protein S3
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Hrubri_0134 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
hrb03011
]
Hrubri_0134 (rpsC)
Ribosome [BR:
hrb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Hrubri_0134 (rpsC)
Bacteria
Hrubri_0134 (rpsC)
Archaea
Hrubri_0134 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
KH_KhpA-B
VAR1
PG_binding_4
DUF6409
Motif
Other DBs
NCBI-ProteinID:
ALU87363
LinkDB
All DBs
Position
153942..154760
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AA seq
272 aa
AA seq
DB search
MGQKIHPTGFRLAVTRNWGSRWYAGNNNFADMLNEDLKVRAYLKKKLKNASVGRVVIERP
AKNARITIYSSRPGVVIGKKGEDIEVLKTALAKLMGVPVHVNIEEIRKPEADAQLIADSI
CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA
DIDYGFGEAETTYGIIGVKVWVYKGDRLANGEAPVLVGEPEDDKKRRGPRRDDGKPGARP
RSKTGAPGAGAKRGGGRPQAADAGVSAEKAGE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaagattcatccaaccggtttccgtctggcggttacgcgtaactggggctcg
cgttggtatgcaggcaacaacaactttgccgacatgctcaacgaggacctgaaggtccgt
gcttacctgaagaagaagctgaagaacgcttcggttggccgcgtggtcatcgagcgtccg
gccaagaacgcccgcatcaccatttacagctcccgtccgggcgttgtgatcggcaagaag
ggcgaagacatcgaagtgctgaagaccgcactggccaagctcatgggcgtgcccgtgcac
gtcaacatcgaagaaatccgcaagccggaagccgatgctcagctgatcgctgactcgatc
tgccagcagctggaaaagcgcatcatgttccgtcgcgccatgaagcgtgcgatgcagaac
gccatgcgtctgggcgcccaaggcatcaagatcatgtcctcgggtcgtctgaacggcatc
gaaatcgcacgtaccgaatggtaccgcgaaggccgtgtgcctctgcacaccctgcgcgcc
gatatcgactatggcttcggcgaagctgaaaccacctacggcatcatcggtgtgaaggtg
tgggtctacaagggcgatcgcctggcaaacggcgaagcgccggtgctggtcggcgaaccg
gaagacgacaagaagcgtcgtggcccccgtcgtgacgacggcaagccgggtgcacgtccc
cgctccaagactggcgctcctggcgctggtgcaaagcgtggcggtggtcgtcctcaagct
gccgatgccggtgtgtcggctgagaaagcaggagaataa
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