Herbaspirillum rubrisubalbicans: Hrubri_0153
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Entry
Hrubri_0153 CDS
T04238
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Hrubri_0153 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrb03021
]
Hrubri_0153 (rpoA)
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_0153 (rpoA)
Enzymes [BR:
hrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Hrubri_0153 (rpoA)
Transcription machinery [BR:
hrb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Hrubri_0153 (rpoA)
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Hrubri_0153 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ALU87382
LinkDB
All DBs
Position
163408..164385
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIEVETLAPGHAKVVMEPFERGYGHTLGNALRRVLLSTMSGYAPTEVTIAG
VVHEYSSLDGVQEDVVDILLNLKGVVFKLHNRDEVTLTLKKEGEGAVLASDIDLPHDVEL
INPDHVIANLTGGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVITPEEAIRQSARVLVDQLNVFAALEGTEATAEAP
SRAPQVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtttgttgaagccccgcatcatcgaagtggaaaccctggcccccggtcac
gcaaaggtcgtgatggagccgttcgagcgtggttacggtcacaccctgggcaacgcgctg
cgtcgcgtgctgctgtcgaccatgagcggttacgctcccaccgaagtgaccatcgctggt
gtggtgcacgaatactcgtccctggacggcgtgcaggaagacgtcgtcgacatcctgctg
aacctgaagggcgtggtcttcaagctgcacaaccgtgacgaagtcaccctgaccctgaag
aaggaaggcgaaggcgccgtcctggcttccgatatcgatctgccgcacgacgtcgaactg
atcaacccggatcacgtcatcgccaacctgaccggtggcggcaagctggacatgcagatc
aaggtcgaaaagggccgtggctacgtgccgggtaacgtgcgtcgcctgtccgaagacacc
aacaagaccatcggtcgcatcattctggatgcctcgttctcgccggtgcgtcgcgtgtcc
tacgccgtcgaatccgcgcgtgtggaacagcgtaccgacctggacaagctggtcatgaac
atcgagaccaacggcgtcatcaccccggaagaagcgatccgccaatcggcgcgcgtgctg
gttgatcaactcaacgtgttcgccgccctggaaggcaccgaagcgacggcagaagcaccg
tcgcgcgcaccgcaggtcgatcctatcctgctgcgtccggtggacgacctggaactgacc
gtccgttcggcaaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgcagcgaaaacgaactgctgaagaccccgaacctgggtcgcaagtcgttgaacgaaatc
aaggaagtcctggcttcgcgtggcctgaccctgggcatgaagctggaaaactggccgccg
gccggtctggaaaagtaa
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