Herbaspirillum rubrisubalbicans: Hrubri_0187
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Entry
Hrubri_0187 CDS
T04238
Name
(GenBank) AraC family transcription regulator protein
KO
K18991
AraC family transcriptional regulator, activator of mtrCDE
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrb03000
]
Hrubri_0187
Transcription factors [BR:
hrb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Hrubri_0187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_6
HTH_18
HTH_AraC
Cupin_2
Cupin_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALU87416
LinkDB
All DBs
Position
197723..198700
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AA seq
325 aa
AA seq
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MDALSRLLSLHPVRAGLDIRCRFGQPWHLPHPALPEGVAPYHFILEGQAQLQLAQGEPLA
LQAGDLVVLTRGAAHGIFTAPAAQAIAPRQGVTAAPVQLHVNDDQGGGAQPLSDFLCGQF
HFDAPHSNALVQALPEVLLVRGAELPDGDGLRTLAALLRNECGGADGRGELRAGAQAVVA
ALAAALFGLAIRAWLAQGGPQPGLLALLAHPVLQEALQAMLEAPHEDWSLPRLAALCHMS
RATFVRRFQEVGGATPGEVVQQLRMSQAARFLSYSKMSTAQIGEAVGYQSEAAFNRVFKK
FSGMGPGAYRRKMRGAQALQGAISE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcagccgtctcttgtccctgcatccggtgcgcgccggcctggatatccgt
tgtcgcttcggccagccctggcatctgccgcacccggccctgcccgagggggtggcgccg
tatcacttcatcctggaggggcaggcgcaattgcaactggcccagggcgagccactggcg
ctgcaggcgggcgacctggtcgtcctcacgcgtggtgctgcccacggcatcttcactgcg
cccgccgcgcaggccatcgcgccgcgccagggcgtgactgccgcgccggtgcagctgcat
gtcaacgatgaccagggcggaggggctcagccgctatccgatttcctctgtggacaattt
cattttgatgccccgcattccaatgccctggtacaggccttgcccgaggtgctgctggtg
cgtggcgccgagctgcccgatggcgatggcctgcgcacgctggctgctttgttgcgcaac
gaatgcggcggtgccgatgggcgtggagagttacgagccggtgcccaggcggtggtagcc
gccttggcggcggccctgttcggattggccatccgtgcctggctggcccagggtggcccg
cagccgggtttgctggcgttgctggcccatcccgtattgcaggaggcgctgcaggcgatg
ctggaagccccgcacgaagattggtcgctgccacgcctggcagcgttgtgccacatgtcg
cgtgctaccttcgtgcggcgtttccaggaagtgggaggcgcgaccccgggcgaggttgtg
cagcaactgcgcatgagccaggcggcgcgctttttgagctatagcaaaatgtccacggcg
cagatcggagaagctgtgggctaccagtcggaggcggccttcaatcgcgtcttcaagaaa
ttcagcgggatggggccgggcgcttaccggcgcaagatgaggggcgcgcaagcgctgcaa
ggagcgatcagcgaatag
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integrated database retrieval system
