Herbaspirillum rubrisubalbicans: Hrubri_0189
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Entry
Hrubri_0189 CDS
T04238
Symbol
livK
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_0189 (livK)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_0189 (livK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_0189 (livK)
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hrubri_0189 (livK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Peripla_BP_4
PGM_PMM_I
Motif
Other DBs
NCBI-ProteinID:
ALU87418
LinkDB
All DBs
Position
199466..200602
Genome browser
AA seq
378 aa
AA seq
DB search
MFKRVSGLNIIAASLALIPAFAMAQETQVVKIGFSSPLTGPQASAGKDNQGGLMMAVERL
NAQPITVGGKKIKFEVLAEDDQADPKQGVAVAQKLADQGVKAIVGPYNSGVTIPASRVYN
DAGIVVATVASNPKITQQGFATLFRVAASDSQLGGKMALYAAKELKLKRVAVIDDRTAYG
QGLAEEFAKVAKANGIEVVSKDFTNDKATDFTAILTSIKSKKPDAVFLGGYAPQGGPIKR
QMKQLGIDVPLMGGDGICSPEMGRLGGDAIGESVYCTQGGTMLDKAKEGKVFSDDYQKKY
NRPAETYAVSFYDGMMLIAQAMKQANSVEPKAFGPALAKINYKGVAGQYDFDANHDLKQS
PVTVYRFKDGLPVPLSSY
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcgcgtctccggactcaacatcatcgccgcctcgctggcgctgatccccgcc
ttcgccatggcgcaggaaacccaggtcgtcaagatcggtttctccagcccgctgaccggg
ccgcaggcatcggccggcaaggataaccagggcggcctgatgatggcagtcgagcgtctg
aatgcgcaacccattaccgtgggcggcaagaagatcaagttcgaagtcctcgccgaagat
gaccaggccgatcccaagcagggcgtggccgtggcacagaagctggccgaccagggcgtc
aaggccatcgtcggtccctacaattcgggtgtgaccatccccgcctcgcgcgtctataac
gatgccggcatcgtggtggccaccgtggcctccaaccccaagatcactcagcaaggtttc
gccaccctgttccgcgtggccgccagcgatagccaactgggcggcaagatggccctgtac
gcggccaaggagctcaagctcaaacgcgtggccgtgatcgatgaccgcaccgcctatggc
cagggcctggccgaggaattcgccaaggtcgccaaggccaacggcatcgaagtggtcagc
aaggacttcaccaacgacaaggccaccgacttcaccgccatcctgacctcgatcaagagc
aagaagcccgacgccgtgttcctgggcggttacgccccgcaaggcggcccgatcaagcgc
cagatgaagcagctggggatcgacgtgcccttgatgggcggcgacggcatctgttcgccg
gaaatggggcgcctgggtggtgacgccatcggcgaaagcgtctactgtacccagggcggc
accatgctggacaaagccaaggaaggcaaggtcttctccgacgactaccagaagaagtac
aaccgtcctgccgaaacctatgcagtttccttctatgacggcatgatgttgatcgcccag
gccatgaagcaggccaactcggtcgagcccaaggccttcggcccggccctggccaagatc
aactacaagggcgtggccggtcagtatgacttcgacgccaaccacgacctcaagcagtcg
ccggtgacggtatatcgcttcaaggatggcctgccggtccccctgagcagctactga
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