Herbaspirillum rubrisubalbicans: Hrubri_0307
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Entry
Hrubri_0307 CDS
T04238
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00300
Lysine biosynthesis
hrb00550
Peptidoglycan biosynthesis
hrb01100
Metabolic pathways
hrb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Hrubri_0307 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Hrubri_0307 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Hrubri_0307 (murF)
Enzymes [BR:
hrb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Hrubri_0307 (murF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ALU87536
UniProt:
A0A0U2SA02
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All DBs
Position
351779..353239
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AA seq
486 aa
AA seq
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MMRFDFRQLLEWIRTAEEAASAHTVPGVVNAPASLLELNDVVTDSRAVKPGNVFVALRGE
RFDAHDFLDAVAAQGAAAVVVERVPAGLSLPAIVVPDSRAALGQIAHGWRVQRQIPVIGV
TGSNGKTTVKEMIAAILAAAFGEDGYLGTRGNFNNEIGVPLTLFRLRAQHQAAVIEMGMN
HPGEIAVLSRIAAPTLGLVNNAQREHQEFMASVEAVARENGAVIRHLPADGVAVFPADDD
FTALWREEAGARRVLTFGLNAQADVSASYQATAFGSTLQVTAKGLAVPPAQFKVELAAVG
EHNVRNALAATACALGAGIAVDAVVRGLQSFAPVNGRLQRKQAKSGALVIDDTYNANPDS
VRAAIDVLASIAGPRVLVLGDMGEVGDQGPQFHAEIGAYARSRCIPLFFGLGELTKHAVA
AYGAPLQGVAQAMHCDDIATLNAAVEQAAPQGATVLVKGSRFMKMERVVQHLVNVESLTQ
HQQETH
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgattcgatttccgccagttgctggaatggatccgcactgccgaagaggcggcc
tcggcgcataccgtgcccggcgtggtcaatgccccggccagtctgcttgagctcaatgac
gtggtcaccgacagccgtgcggtcaagcccggcaatgtcttcgtcgccctgcgcggcgag
cgtttcgatgcgcatgacttcctcgacgccgtggccgcccaaggcgctgccgccgtggtg
gtggagcgcgtgccggcgggcttgtcgctgccggccatcgtggtgcccgacagccgcgct
gccttgggccagatcgcccatggctggcgcgtgcagcgccagatcccggtcattggtgtg
accggcagcaacggcaagaccaccgtcaaggaaatgattgccgccatcctcgccgccgcc
tttggcgaagacggctacctgggcacgcgcggcaacttcaacaacgagatcggcgtaccg
ctgaccttgttccgcctgcgggcgcagcaccaggccgccgtcatcgagatgggcatgaac
catccgggcgagatcgccgtgctctcacgcatcgccgcgcccaccctgggcctggtcaac
aatgcccagcgcgagcaccaggaattcatggccagcgtggaagcggtggcgcgtgaaaac
ggcgccgtgatccgccaccttcccgccgatggcgtggccgtcttcccggccgatgatgat
ttcaccgcgctgtggcgcgaagaggctggcgcccgtcgcgtgctgacctttggcctgaat
gcgcaagccgatgtcagcgccagctaccaggccacggccttcggcagcacgctgcaggtt
accgccaagggcctggctgtgccaccggcccagttcaaggtcgagctggccgccgtcggc
gaacacaacgtgcgcaatgccctggctgccaccgcctgtgcattgggtgccggtatcgcg
gtggacgccgtggtgcgtggcttgcagagcttcgccccggtcaatggccggttgcaacgc
aaacaggccaagagcggtgccctggtgatcgacgacacctacaacgccaaccccgattcg
gtgcgcgctgccatcgacgtgctggccagcatcgccggcccgcgtgtgctggtgctgggc
gacatgggcgaggtcggcgaccaggggccgcagttccatgccgagatcggcgcctatgcg
cgcagtcgttgtatcccgctcttcttcggactgggcgaattgacgaaacacgccgtcgct
gcgtatggcgccccgctgcaaggcgtggcccaggccatgcattgcgacgatatcgccacc
ctcaatgcagcggtggagcaggccgcgccgcaaggcgcgaccgttttggtaaaaggttca
cgcttcatgaagatggagcgagttgtacagcatctggtcaacgttgaatccctcacgcaa
catcaacaggagacccattaa
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