Herbaspirillum rubrisubalbicans: Hrubri_0409
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Entry
Hrubri_0409 CDS
T04238
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Hrubri_0409 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hrb01007
]
Hrubri_0409 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrb03016
]
Hrubri_0409 (valS)
Enzymes [BR:
hrb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Hrubri_0409 (valS)
Amino acid related enzymes [BR:
hrb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Hrubri_0409 (valS)
Transfer RNA biogenesis [BR:
hrb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Hrubri_0409 (valS)
Prokaryotic type
Hrubri_0409 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
MRP-S35
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ALU87637
LinkDB
All DBs
Position
complement(456912..459731)
Genome browser
AA seq
939 aa
AA seq
DB search
MELAKSFEPAEIEKFWREEWEKRGYFAATTDAEKPSFSIQLPPPNVTGTLHMGHAFNQTI
MDGLTRYHRMRGYNTAWIPGTDHAGIATQIVVERQLDAQKVSRHDLGREKFVEKVWEWKE
KSGSTITGQMRRMGASTDWAREYFTMDTKMSKAVTEVFVRLYEQGLIYRGKRLVNWDPVL
GTAVSDLEVVSEEEDGSMWHIKYPLADGSGHIVVATTRPETMLGDVAVAVDPTDERYAAL
VGKMIKLPLVGREIPIIQDEYVDKEFGTGCVKITPAHDFNDYQVGARHNLEMISVFTLKA
TINENAPEKYQGLDRFEARKQIVADLDALGLLEQVKPHKLMVPRGDRTGVVIEPMLTDQW
FVAMSKPAPEGTFFPGKSIAETALEKVSSGEIKFVPENWTNTYNQWLNNIQDWCISRQLW
WGHQIPAWYDEDGGIYVARTEEEAKKQAGGKAVKRDEDVLDTWFSSALVPFSTLGWPEET
PDYKLFLPSSVLVTGFDIIFFWVARMVMMTTHFTGKVPFDTVYVHGLVRDASGQKMSKSK
GNTLDPIDLIDGIGVDELVAKRTVGLMNPKQAASIEKATRKEFADGIPAFGTDALRFTFA
SLATLGRNINFDLNRCEGYRNFCNKLWNATRFVLMNTEGQDCGFDGHVKGVCDKEKLQFS
KADRWIVSLLQRTEAEVEKGFADYRFDNIATAIYKFVWDEYCDWYLEMAKAQIQNGNEAQ
QRATRRTLLRVLESVLRLAHPVLPFITEQLWQSVAPLTDRKPDPAGDSIMRQAYPRPDLE
KVDAEAEAWVAQFKAYTDACRNLRGEMQLAPSLRVPLIVEATNAADAAAVESFLPYLQGL
VRLSETTVVAQLPESPAPVAIVGEVKLMLKVEIDVAAERERLGKEVTRLTAEIAKANGKL
SNESFVARAPEAVVAQEKERVANFSATLEKVKEQLAKLK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaattagccaagtcgttcgagcccgccgagattgagaaattctggcgcgaggagtgg
gaaaagcgcggttacttcgccgccaccaccgacgcggagaagccctcgttttccatccag
ttgccgccgcccaatgtgaccggcacgctgcacatggggcacgcgttcaaccagaccatc
atggatggcctgacgcgctaccaccgtatgcgcggctacaacaccgcgtggattcccggc
accgaccatgcgggcatcgccacccagatcgtggtggaacgccagctggatgcgcagaag
gtctcgcgccacgacctgggccgtgaaaaattcgtcgaaaaggtgtgggagtggaaggaa
aaatccggctccaccatcaccggccagatgcgccgcatgggcgcttccaccgactgggcc
cgggaatacttcacgatggacactaagatgtccaaggccgtcaccgaagtcttcgtgcgc
ctctacgagcagggcctgatctaccgtggcaagcgtctggtgaactgggacccggtgctg
ggcaccgccgtctccgacctggaagtggtgtcggaagaagaagacggctccatgtggcac
atcaagtacccgctggccgatggcagcggccatatcgtggtggccaccacccgtccggaa
accatgctgggcgacgtcgccgtggcggtggacccgaccgatgagcgctacgccgcgctg
gtgggcaagatgatcaagctgccgctggtgggccgcgagatccccatcatccaggatgaa
tacgtcgacaaggaattcggcaccggttgcgtgaagatcaccccggcgcacgacttcaac
gactatcaggtcggcgcacgccacaacctggaaatgatcagcgtcttcaccttgaaggcc
accatcaacgagaacgcgcccgagaaataccagggcctggaccgcttcgaggcgcgcaag
cagatcgtggccgatctggacgcgctgggcctgttggaacaggtcaagccgcacaagctg
atggtgccgcgtggcgaccgtaccggcgtggtgatcgagccgatgctgaccgaccaatgg
ttcgtggccatgagcaagccggcaccggaagggaccttcttccccggcaagtcgattgcc
gaaaccgcgctggaaaaggtgtcctcgggcgagatcaagttcgtgcccgagaactggacc
aacacctacaaccagtggctcaacaacattcaggactggtgtatctcgcgccaactgtgg
tggggccatcagatcccggcctggtacgacgaagacggcggcatctacgtcgcccgcacc
gaagaagaagcgaagaagcaagccggcggcaaggccgtcaagcgcgacgaagacgtgctc
gacacctggttctcctcggcactggtgcctttctccaccctgggctggccggaagaaacg
ccggactacaagctgttcctgccctcctcggtgctggtgacgggcttcgacatcatcttc
ttctgggtggcgcgcatggtcatgatgaccacgcacttcaccggcaaggtgccgtttgac
accgtctacgtccacgggctggtacgcgatgcctcgggccagaagatgtccaagtccaaa
ggcaacacgctggatccgatcgacctgatcgacggtatcggcgtggatgaactggtggcc
aagcgtaccgtaggcctgatgaatcccaagcaagcggccagcatcgagaaggccacccgc
aaggaattcgccgatggcattccagccttcggcaccgatgcgctgcgcttcaccttcgcc
tcactggcgaccctgggccgcaacatcaacttcgacctgaaccgctgcgaaggctatcgc
aacttctgcaataagctgtggaacgccacccgcttcgtgctgatgaataccgaaggccag
gactgcgggttcgatggccacgtcaagggtgtctgcgacaaggagaagctgcaattctcc
aaagccgaccgctggatcgtgtcgctcttgcagcgaaccgaggccgaagtggaaaagggc
tttgccgactaccgcttcgacaatatcgctaccgccatctacaagttcgtctgggacgag
tactgcgactggtatctggaaatggccaaggcccagatccagaacggcaacgaagcgcaa
cagcgcgccacccgccgcaccctcttgcgcgtactggaaagcgtgctgcgcctggcccat
ccggtgctgcccttcatcaccgaacaactgtggcagagcgtggccccgctgaccgatcgc
aagcccgatccggcaggcgactccatcatgcgccaggcctatccgcgcccggacctggaa
aaggtcgatgccgaagccgaagcctgggtcgcccagttcaaggcctacaccgacgcctgc
cgcaacctgcgcggcgagatgcaactggcgccgtcgctgcgggtgccgctgatcgtggaa
gccaccaatgcggctgacgcagcagcggtggaatccttcctgccctacctgcaaggtctg
gtgcgcctgtcggaaaccacggtggtggcgcaactgccagagtcgccggcgccggtggcc
atcgtcggcgaggtcaagctgatgctgaaggtggaaatcgacgtggctgccgagcgtgaa
cgcctgggcaaggaagtcacccgtctcaccgccgagatcgccaaggccaatggcaagctg
tccaacgaaagcttcgtggcgcgcgcgcccgaggcggtggtggcgcaggagaaggaacgc
gtcgccaacttcagcgctacgctggaaaaggtaaaggaacaattggccaagctgaagtaa
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