Herbaspirillum rubrisubalbicans: Hrubri_0410
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Entry
Hrubri_0410 CDS
T04238
Symbol
thiC
Name
(GenBank) thiamine biosynthesis
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00730
Thiamine metabolism
hrb01100
Metabolic pathways
hrb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Hrubri_0410 (thiC)
Enzymes [BR:
hrb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Hrubri_0410 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ALU87638
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Position
460183..462096
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AA seq
637 aa
AA seq
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MNANPKFLSATATVDEAAVQPLPNSRKIYVTGSRPDIRVPMREISQADTPAMFGSEKNPP
ITVYDTSGPYTDPDVKIDIRAGLATPRLPWILERNDTEELAGPTSEYGQQRLNDPALAEL
RFNLHRKPRRAKAGANVTQMHYARRGIITPEMEFIAIRENLRRKEYLEQLKASGPMGNKL
ADLMGRQHPGQSFGASIPAEITPEFVRDEVARGRAIIPANINHPEVEPMIIGRNFLVKIN
ANIGNSAVTSSIGEEVEKMTWAIRWGGDNVMDLSTGKNIHETREWIIRNSPVPIGTVPIY
QALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTAKRMTGIVSRGGS
IMAKWCLAHHRESFLYEHFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLGELRTLG
ELTQIAWKHDVQVMIEGPGHVPMHLIKENMDLQLEQCHEAPFYTLGPLTTDIAPGYDHIT
SGIGAAQIGWYGTAMLCYVTPKEHLGLPNKTDVKDGIITYKIAAHAADLAKGHPGAQIRD
NALSKARFEFRWEDQFNIGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQEV
RDYAAKEGISEIDALKQGMQVKSVEFVKMGAEIYAKQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaacccgaaattcctgtccgcgacggccaccgtcgatgaggcagccgtccag
cctctcccgaattcccgcaagatctatgtgaccggttcgcgcccggacatccgcgtaccc
atgcgcgaaatcagccaggctgacacgcccgccatgttcggttccgaaaagaaccccccc
atcaccgtctacgacacctccggcccctacaccgacccggacgtgaagatcgacatccgc
gccggtctcgctaccccgcgcctgccgtggattctggaacgcaacgatacggaagaactg
gccggccccacctccgaatacggccagcagcgcttgaacgatccggccctggccgagctg
cgcttcaacctgcaccgcaagccgcgccgcgccaaggctggggccaacgtcacccagatg
cactatgcccgccgcggtatcatcacccccgagatggaattcatcgccatccgcgaaaac
ctgcgccgcaaggagtatctggagcaactcaaggcctccggccccatgggcaacaagctg
gctgacctgatgggccgccagcatcccggccagtccttcggcgcctccattcccgccgag
atcacgcccgaattcgtgcgtgacgaagtggcacgcggccgcgccatcatccccgccaac
atcaaccacccggaagtcgaaccgatgatcatcggccgcaatttcctggtcaagatcaac
gccaacatcggcaactcggccgtgacctcttccattggcgaagaagtcgaaaagatgacc
tgggccatccgctggggcggcgacaacgtcatggatctgtccaccggcaagaacatccac
gaaacccgtgaatggatcatccgcaattcgccggtgcccatcggcaccgtgccgatctac
caggccctggaaaaggtcaacggcaaggcagaggatctgacctgggaaatcttccgcgat
accttgatcgagcaagccgagcagggcgtggactacttcaccatccacgccggcgtgcgt
ctgcaatacgtcccgctgacggccaagcgcatgaccggcatcgtctcgcgcggcggctcc
atcatggccaagtggtgcctggcgcatcaccgcgaatccttcctctacgaacacttcgaa
gagatctgcgagatcatgaaggcctatgacgtcagcttcagcctgggcgatggcctgcgt
cccggttccatctacgacgccaacgacgaagcccagctgggcgagctgcgcaccctgggc
gaattgacccagatcgcctggaagcacgatgtgcaagtgatgatcgaaggccccggccac
gtgcccatgcatctcatcaaggaaaacatggacctgcaactggagcagtgccacgaagcg
ccgttctacaccctcggtcctctgaccactgacatcgcccccggctacgatcacatcacc
tccggcatcggtgccgcccagatcggctggtatggcacggccatgctgtgctacgtcacc
cccaaggaacacctgggcctgcccaacaagaccgatgtgaaggacggcatcatcacctac
aagatcgccgctcacgccgccgacctggccaagggccatccgggcgcacaaatacgcgac
aacgccttgtccaaggcgcgcttcgaattccgctgggaagaccagttcaacatcggcctg
gacccggacaaggcgcgcgaattccacgacgaaaccctgcccaaggattcggccaaggtg
gcccacttctgttccatgtgcggcccgcacttctgctccatgaagatcacccaggaagtg
cgcgactacgccgccaaggaaggcatctccgagatcgatgcattgaagcaggggatgcag
gtcaagtcggtggagttcgtcaagatgggcgccgagatctatgccaagcagtaa
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