Herbaspirillum rubrisubalbicans: Hrubri_0420
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Entry
Hrubri_0420 CDS
T04238
Symbol
fhaB
Name
(GenBank) filamentous hemagglutinin outer membrane protein
KO
K15125
filamentous hemagglutinin
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrb00536
]
Hrubri_0420 (fhaB)
Glycosaminoglycan binding proteins [BR:
hrb00536
]
Heparan sulfate / Heparin
Microbial pathogens
Hrubri_0420 (fhaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Endonuclea_NS_2
Fil_haemagg
ESPR
Endonuclease_NS
DUF6862
ChapFlgA_N
DUF6381
CSD
Motif
Other DBs
NCBI-ProteinID:
ALU87648
LinkDB
All DBs
Position
471917..480610
Genome browser
AA seq
2897 aa
AA seq
DB search
MNRQRYKLVFNRHRGQLMAVAEIASSIQHQGRTAGPSEAMPDLLPSALRFSLLSVALALA
MNTVAHAQILGDRTAPRTQQPTVLVTPNGVPVVNIQTPSTAGVSLNRYRQFDVGTNGVIL
NNARSTTSTQLGGYVAGNPWLATGAARVIVNQVNSPNPSYLRGYLEVAGNRAQVVVANPA
GITCAGCGFINANRATLTTGVPQINNGNLDSYRVASGAVNIEGNGLDASRTDYAEIIARA
VQVNAGVWAPELKVSAGLNTVSADHASVQPGVAPSDAAPAVAIDVAQLGGMYAGHIYLTS
TEHGVGVRNAGTIGAAVGQAVVTADGRLENSGSLSANGLLAVQTTGGVRNSGELGSKSAA
SITTTALDNAGSMASSGALTVQASDSVLNTGSIGGEGPVQVSATSIDNRNSLGSSASLTM
QASAGIRNSGTLQATTDATLNAGTLDNSGTLSARQGSVRVNSSGSSTNSGRIEAVQTVAV
QADGLTNSGNINAVDALRVQAAQAISNSGTLGANGGVELKSATLDNRGTLASSQDALTIN
TSGQFTNQGQVSAAQSLTLTGAGIDNSAGSLNATDIHLDSQSQTFSNRGGQVSAQRDLQI
TSGALDNSNGTLAAQGQLTVGSGDLNNDGGLLQAGTTLKIDASGKTVRNSHSGSTRGIQA
QGTVDIAAATLVNAGLVSSNSDINLNTATLDNRAGSIGATGKLTVQGNSVTNSGGQLQAK
QGVDIQAGSGLVDNSGGLLRSDGTVNVQAGSVRNDNTQGQDQGVEGATVNVAATDISNRQ
GAVRGDAITLTASGRIDNGNGLISATNSAVLTDANPSTRTLAIDNSNGTIIAGRQTTLLA
YSFTGSGRVLSQKDLRMDLVASILHTGQIGATAELDLRTAGTFTNAGSVGAGGTLTLTAA
TIDNQASGSLVGNTLRLKATDVHTFINRGLIDGVNTIIESSTVNNLGTGRIYGDNIAIGA
DVLNNQAETVDGVTSAPVIAARNRLDIGAGVINNSEHGLIYSVGDMVIGGALDANKKVVG
SAREVNNSSATINADGNLSIAAGSINNNNAHLETTDQTGPGKRIINFRLNGSSQLLDSNS
AWLYNRGSGEILNAANWRAMGDEDNYRLLLPSAAYPAERYGPPFDYSRGARGDNAVAIAY
VPPYSQGAMGDADAVYIPPVINYTATDRIWAVMGVTPPQDPGPGPGAEPRPGEMCYDSCY
PVPVDPEVYAAWKAANDVWKPKYDVYIAALLVLNDKIAAFNNNVNSRSYREWTIYDGTEQ
ITRTVVTKSDPGMITSGGNMNLAVGALNNYASQVIAGGTLAGDSVNGTAINNTGPLGMQR
VVSTGSAVYTYIKSHSFSADDRRYDGVPYQSQDIVTNFQLDVSPTSGAGPNRANSVRAVP
ASVSGAAGASAGAASIRIANLDLTLPNNALYRINAGPAQRYLVQTDPQFVGTRNWLSSDF
MLNQLGLQSGVRQLGDGFYEQQLVQRQIQQITGQRYLAGYSSNEAQYQALMNAGLQVAQA
QRYTLGVALTDAQVAALKTDIVWLVKQTVTLADGSTQEVLVPQVYVHASNVEVTGQGTLI
AGNDVAFQAAQDIVNSGGTIAARKGVSLAGANLQNLGGRISGADVQVAAAQDINNIGGTI
DARNSLVATAGRDINSASTTVATANAVTSGTNINQNASMSVSEANGSLTAVAGRDINLKA
SGASADNITLVAQRDVNISTVHETSQEKLAWDNDNRAEVNHDNAIGSTVQGKDISVTAGR
DINAQAAYVNAEGSLAANAGNNVNIGTDVSTASARDQHKKTDAGGVLSSRTVTTDDSSSE
RVNQGTTLSGNTVVVRAGKDINVTGSNVVATQGVGMAAGNDVNIVAAVDSSTKNNFRKET
TSGVMGAGFGVTIGTREQSHDGKSQGQTASASTIGSTDGNVSIVAGNRYTQVGSDVMAPK
GDIDIAAKSVEIRAAEQASRTETEDKYKQSGLTVAVTSPVISAMQTVDQMVESSGKTKNG
RVKALAAATAGMSLYSAAGEMQKAGSAEGGSNIGISATIGSSQNGSRSEQNTVTQRGATV
ASGGNMSIRATGDGANSNITIAGSDINAKGNLALKADNDINLIAAQNSDEQHSTRSSSSW
GVGITAQIGSQSKLGITANAAGSRGKSDGKDVSNVMTQVRSGGQIKIDSGRDTNLIGATV
SGEQVQANVGRDLNIASVQDTSTFKSRDQSIGGSATIGYGSSASISASRSRVDADYASVG
QQAGIMAGNGGFQINVKGNTDLKGAQIASTDQAVEQGRNSLTTGTLTSSDIQNRSQYSAE
SQSASAGTSGGKPGGGIGIGNASGSETSVTRSGVSGAAVTITDAQAQQARTGQSADQAVA
SLDASVRTGKDSSNSLSKSWDGNQLREDVEAQAKITQAFGQQASTLIGNYAEEQQKKAAD
LRKQAADTNDPQQAKELNDQASALERNWGPDGTMRVLAHSVVGGLTGGLAGAAGAAAGTL
TAPNVASALDKAGVDSDLAKALTGLSSTLVGAAVGGTAGGAAAYNEVVNNYLHHAESKRL
ELLRNKQMFGKCDADCENEIKALEILDKTRDAEFQACLGQTSERCASVIRDVRQAASEYI
RSKASVISIVSGAGEDKAVELANQTMNGYTVWNKAAGLAEGVRDILNTLGEAAYTGFNLL
LQDPQTKADVQNAIGSMLTYLSDIKNWPQLLGAMSSEQREKLALAYETGDGATIAKMAGE
AILNVPTAGGGGTIKNVARVTEELAAIEKLLKRADLDRVVKVPAGSKGNWEPSINTGKTG
QLSPKTAYLLDNGHTYITDASGRVTKVEGSLNLNTMDRNGYQQLCAGKSGCAGDDGGHLI
ASSLGGAGDRINMVPQAATLNRGDWKAMENFLRDELQAGKNVNISIDVRYSTSSRRPDEF
RVLAIIDGKSVPFRFRQ
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcagcgttacaagctggttttcaaccggcatcgcggccaattgatggccgtc
gcagaaattgcctccagcatccagcaccagggccgaacggccggcccgagcgaggccatg
cccgatctgctgccgtcggccttgcgcttttcgctgctgtcggtagccctggcgctggca
atgaataccgtggcccacgcccagatcctgggcgaccgcacggccccgcgcacccagcaa
cccaccgtgctggtgacccccaatggcgtgccggtggtcaacatccagacccccagcaca
gccggggtgtcgctcaatcgttatcgccagttcgatgtcggcaccaatggcgtcatcctc
aacaacgctcgttccacgaccagcactcaactgggcggctacgtggccggcaacccctgg
ctggccacgggggcggcgcgggtgatcgtgaatcaggtcaattcgcccaaccccagttac
ctgcgcggctacctggaagtggcgggcaaccgggcccaggtggtggtggccaacccggcc
ggcatcacctgcgccggctgcggcttcatcaacgccaaccgcgccacgctcaccacgggt
gtgccgcagatcaacaacggcaacctggacagctatcgcgtggccagtggcgcggtgaac
atcgaaggcaatgggctggatgccagccgcaccgactacgccgagatcatcgcgcgcgcg
gtgcaggtcaacgcgggggtatgggcgcccgaactgaaggtcagcgccggcttgaacacg
gtcagcgccgaccatgccagcgtacagcccggcgtggcccccagcgacgccgccccggcg
gtggccatcgacgtggcgcaactgggcggcatgtatgccggccatatctacctgacttcc
accgaacatggcgtgggcgtgcgtaacgccggcaccatcggcgctgcggtcggacaggcc
gtggtcaccgccgatggtcgcctggaaaacagcggcagcctcagcgccaacgggttgctg
gccgtgcagaccaccggtggcgtgcgcaacagtggagaactgggcagcaagagcgcagcc
agcatcaccaccaccgccctggacaatgccggcagcatggccagcagtggagcgctgacg
gtgcaagccagcgacagcgtgctcaacaccggcagcatcggtggcgaaggtccggtgcag
gtgagcgccacgagcatcgacaaccgcaacagcctcggcagcagcgcgtccctgacgatg
caggcctccgccggcatccgcaacagcggcacgctgcaagcgaccaccgacgccacgctc
aatgccggcacgctggacaacagcggcaccctgagcgcccgccagggcagcgtgcgcgtc
aacagcagcggcagcagcaccaacagtggccgcatcgaagcggtgcagacggttgccgtg
caggccgatggcctcaccaacagcggcaacatcaacgcggtggatgccctgcgcgtgcag
gccgcgcaagccatcagcaacagcggcacgctgggcgccaatggcggcgtcgaactgaag
tccgccaccctggacaaccgcggcacgctggcttccagccaagatgcactgaccatcaac
accagcggccaattcaccaaccagggccaggtcagcgcggcgcagtcgctcacgctcacc
ggcgcgggcatcgacaacagcgccggcagcctcaacgccaccgacatccacctcgacagc
caatcgcaaaccttcagcaaccgcggcggccaggtcagcgcccagcgcgacctgcagatc
accagcggcgccctggacaacagcaacggcacgctggccgcccaaggccaactcaccgtg
ggtagcggcgacctgaacaacgatggcggcctgctgcaagccggcaccaccttaaaaatc
gacgccagcggcaagaccgtgcgcaacagccactccggcagcacacgcggcatccaggcc
cagggcacggtggacatcgccgccgccacgctggtcaatgccggcctggtctcctcaaac
agcgacatcaacctcaacaccgccaccctggacaaccgcgctggttcaatcggcgccact
ggcaagttgaccgtacaaggcaatagcgtcaccaacagcggcggccagttgcaggccaag
cagggcgtggacatccaggccggcagcggccttgtcgacaacagcggcggcctgctgcgc
tcggatggcacggtcaacgtgcaagccggcagcgtgcgcaacgacaacacccaaggccag
gaccagggcgtagaaggcgccaccgtcaacgtggccgccaccgacatcagcaatcgccag
ggcgccgtgcgcggcgacgccatcacgctcacggccagcggccgcatcgacaacggcaac
ggcctgatctccgccaccaacagcgccgtgttgacggacgccaacccgagcacgcgcacc
ctggccatcgacaacagcaacggcaccatcatcgccggacggcagaccaccttgctggca
tattccttcacaggcagtggtcgggtattgagccagaaagacctgcgcatggacctggtc
gcctcaattcttcataccgggcagatcggagccacagccgagctggatttacgcaccgcc
ggcaccttcaccaatgccggctcggtcggcgcgggcggcaccttgacgctgacggccgcc
accatcgacaaccaggccagcggctcgctggtgggcaataccctgaggctcaaggccacg
gatgtacacaccttcatcaaccggggcctgatcgatggcgtgaacacgatcatcgaaagc
agcaccgtcaacaacctcggcacgggccgcatctatggcgacaacatcgccattggcgcg
gacgtgttgaacaaccaggcggaaaccgtcgacggcgtcaccagcgccccggtgatcgcc
gcgcgcaaccgacttgatattggcgctggcgtcatcaacaacagcgaacatggcttgatc
tactcggtgggcgacatggtcatcggcggcgcgctggacgccaacaagaaggtcgtgggc
tcggcgcgggaagtcaacaacagcagcgccaccatcaatgccgatggcaacctgagtatt
gcagccgggagcatcaacaataacaacgcgcatctggagaccacggaccagacgggaccg
ggcaagcgcatcatcaacttccggctaaatggctcatcacaattgctggattccaactcg
gcctggctctacaaccggggttcaggagaaatcctcaatgccgccaactggcgggccatg
ggcgatgaggacaactatcgcttgctgctgccttcggccgcctacccggccgagcgttat
ggacctccgtttgactattcgcgcggtgcccgtggcgataatgcggtggccattgcctat
gttcctccctacagccagggggcgatgggagatgccgatgcggtctacattccaccggtc
atcaattacacggccactgaccgtatctgggcagtcatgggggtgacgccgccgcaggat
ccaggcccaggccccggggcggagccgcgccccggcgagatgtgttatgactcgtgctat
ccggtgccggttgatcccgaggtctatgctgcatggaaagcggccaatgatgtctggaag
cccaagtacgacgtgtacatcgctgcgctgctagtgctcaacgacaagatcgccgccttc
aacaacaacgtcaacagccgctcctaccgcgaatggaccatctacgacggcaccgaacag
atcacccgcacggtggtcaccaagagcgaccccggcatgatcacctccggcggcaacatg
aacctggccgttggtgcgctcaacaactacgccagccaggtcatcgccggcggcacgctg
gccggtgacagcgtcaacggcaccgccatcaacaacaccggcccgctgggaatgcagcgc
gtggtctcgaccggctcggccgtgtacacctacatcaagagccacagcttcagtgccgac
gaccgtcgttatgatggtgtgccttaccagtcacaggacatcgtcaccaacttccagctc
gacgtcagccccaccagcggcgccggccccaaccgcgccaactcggtgcgggcggtgcca
gcgtcggtctcgggggcggcgggtgccagcgccggcgcggccagcatccgcatcgccaac
ctcgacctgacgctgcccaacaatgcgctctaccgtatcaatgctggtcccgcgcaacgc
tacctggtccagactgacccgcaattcgtgggcacgcgcaactggttgtcgtcggacttc
atgttgaaccagttgggcctacagtccggcgtgcggcaactgggcgatggtttctatgaa
cagcaactggtgcaacgccagatccagcagatcaccggccagcgctatctggccggctac
agcagcaacgaagcgcaataccaggcgctcatgaacgccggcctgcaagtggcgcaagcc
cagcgctacactctgggagtcgccctcaccgatgcgcaggtggcggcactgaagaccgac
attgtctggctggtcaagcagacggtgacgctggctgatggcagcacacaggaagtgctg
gtaccgcaggtgtacgtacacgcctccaacgtcgaggtgaccggacagggcacgctgatt
gcgggcaatgatgtagccttccaggcggcgcaggatatcgtcaacagcggcggcaccatt
gctgcgcgcaagggggtgtcgctggccggcgccaatctccagaacctgggcgggcgtatc
tctggcgcggatgtgcaggtggcggcagcacaggacatcaacaacatcggcggcaccatc
gatgcgcgcaacagcctggtggccacagcaggtcgcgacatcaacagcgcttccaccacg
gtagcaacggccaacgctgtcaccagcggcaccaacatcaaccagaatgcctcgatgtca
gtctccgaggccaatggttcgctcactgccgtggccggccgcgacatcaacctcaaggcc
agcggcgcctcagcagacaacatcacgctggtcgcccagcgcgatgtgaacatctccacc
gtccacgaaaccagccaagaaaaactcgcctgggacaacgacaaccgcgccgaagtcaac
cacgacaacgccatcggcagcacggtgcagggcaaggacatcagcgtgaccgcaggtcgc
gacatcaacgcccaggcagcctacgtcaacgccgaaggctcgttggcggctaacgcaggc
aacaacgtcaacatcggcaccgatgtcagcacggccagtgcgcgtgatcagcacaagaag
accgatgcgggtggggtgctgtcttcgcggacggtgaccactgatgacagcagcagcgag
cgcgtcaatcaaggcacgaccctgtctggcaatacggtggtggtgcgcgcgggcaaggac
atcaacgttaccggcagcaatgtcgttgcgacgcaaggcgtgggcatggctgcgggtaac
gatgtcaatattgtggctgccgtggatagcagcactaaaaacaatttccgcaaggagact
accagcggagtgatgggcgcaggcttcggcgtgaccataggcacgcgtgagcagagtcat
gacgggaagagccagggacagacggcgtcggcttccaccattggtagtaccgatggcaat
gtcagcatcgtggcgggcaatcgttatacgcaggtgggtagtgatgtgatggcgcccaag
ggggatatcgatattgcggccaagtcggtggagattcgtgccgcagagcaggcgagccgc
acggagactgaagacaagtacaagcaaagtggcctgacagtggctgtcaccagcccggtg
atctcggcgatgcaaacagtggaccagatggtcgaatcgtcgggcaagaccaagaatggt
cgtgtaaaagccctggcggcagccaccgccgggatgtcactttacagcgccgccggagag
atgcaaaaggccggctcggccgaaggtggcagcaacatcggcatcagcgccacgataggc
agcagccagaacggcagccgcagcgaacagaacacggtgacacaacgcggcgccacggtg
gcctctggcggcaacatgagcatccgtgcaaccggtgatggcgctaacagcaacatcacc
attgccggcagtgacatcaacgccaagggcaacctggccctgaaggcggacaacgacatc
aacctcatcgcggcgcagaacagtgacgaacaacacagcacgcgctcatcgtcgtcatgg
ggcgtgggcatcacggcgcagatcggttcacagagcaaactcggcatcacagccaatgca
gcgggtagccgaggcaagagtgatggcaaggatgtgtccaatgtgatgacgcaggttcga
tccggtggccagatcaagatcgattcgggccgtgatacgaatctgattggcgccactgtg
tcgggggaacaggtgcaggccaacgttgggcgtgacctgaacattgccagcgtgcaggac
accagcaccttcaagagccgtgaccagagcattggtggcagtgcgacgatagggtatgga
tcgagcgccagcatcagcgccagccgcagccgtgtcgatgcggactatgcgagcgtgggg
cagcaagccgggatcatggcgggcaatggtgggttccagatcaacgtgaagggcaatacg
gatctgaagggcgcgcagattgccagcacggatcaggcggtggagcagggcagaaatagc
ctgaccacgggaacacttaccagcagtgatattcagaatcggagccagtactcggcagag
agtcaaagtgccagtgcgggtacgtcaggtggcaagccaggcggaggcattggcatcgga
aacgcctctggtagcgagaccagcgtgacgcgaagtggtgtctcgggcgcggcagtgacc
attacggatgcgcaggcgcagcaggccaggacgggacagagtgcggatcaggcggtggcg
tcgctggatgcatcggtgcgcacgggtaaggacagcagcaatagtttgtcgaagagctgg
gacggcaatcaactgcgagaggatgttgaggcgcaggcgaagattacgcaggcgtttggg
cagcaggcttctacgctgattggtaactacgcagaggagcagcagaagaaggcggctgac
ttgcgtaagcaggctgcggatacgaatgatccacaacaggccaaggaactcaatgatcag
gccagcgcccttgaaaggaactgggggccggatgggacgatgcgtgtgctggcgcatagc
gtcgttggtgggttgaccggcgggcttgcgggcgcggctggtgctgctgcgggcaccttg
acggcgccgaatgtggcctctgctttggataaggcaggtgttgattctgatctggccaag
gcgttgacggggttgtcgagtaccttggtgggggctgctgttggtgggactgcgggtggg
gctgcggcttataacgaagtcgtaaataattatctgcatcatgcggaatctaagagattg
gaactacttagaaataagcagatgtttggaaaatgcgatgccgactgcgaaaacgaaatt
aaagccttagagatacttgataaaacgcgagatgctgaattccaagcttgcttgggtcaa
acatcggaacgttgtgcatcggtcattcgtgacgttcggcaggctgcgtctgaatatatt
cgatctaaagcgtctgtcatatcaatagtctccggtgcgggagaagataaagcggtggag
ttggctaatcagacaatgaacggttataccgtatggaacaaagccgcaggtctagccgaa
ggggtcagagatattctaaataccttgggtgaagctgcgtacaccggcttcaaccttttg
ctgcaagaccctcaaactaaagccgatgtacaaaatgctatcggctcgatgctgacttac
cttagcgacattaagaattggccgcagttactgggagcaatgtcttccgaacagcgagag
aaattagctcttgcttacgaaaccggcgatggcgccacaatcgccaagatggccggtgag
gctatacttaatgttcccactgctggaggtggtggaaccatcaagaacgtcgcgcgcgtc
accgaagagctagctgcaatagaaaagctactgaaacgcgcagatttagatcgtgtagtc
aaagttccagcaggctccaaaggaaattgggagccgtcgatcaacactggaaaaactggg
cagttgtcacccaagactgcctacttgctagataatggccatacctacatcaccgatgcc
tctggccgggtgacaaaagttgaaggtagcttgaacctaaacaccatggacagaaacggt
taccaacaactgtgcgctggaaagagtggatgtgcaggcgatgatggtgggcatttgatt
gcgagtagtctcggtggggcgggagatcgaatcaatatggttccgcaggctgcaacgctg
aatcgtggtgattggaaagcaatggaaaactttttgcgggatgagcttcaggctggcaag
aacgtaaatattagtattgatgtcaggtatagcacgtcttctagaaggccagatgaattt
agggttttggccataattgacggaaagtcagtgccattcaggtttcgacaataa
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