Herbaspirillum rubrisubalbicans: Hrubri_0801
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Entry
Hrubri_0801 CDS
T04238
Symbol
livK
Name
(GenBank) ABC-type branched-chain amino acid transport system, periplasmic component protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_0801 (livK)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_0801 (livK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_0801 (livK)
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hrubri_0801 (livK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
DUF7539
Motif
Other DBs
NCBI-ProteinID:
ALU88018
LinkDB
All DBs
Position
917465..918610
Genome browser
AA seq
381 aa
AA seq
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MQKIKMIPVATALVAAFAFAGAAQAQEVIKIGHVAPLTGPNAHIGKDNENGARMAVDELN
AKGFMIAGKKVTFQLVPQDDASDPKQATTVAQALVDAKVKGVVGHMNSGTTIPASKIYYD
AGIPQISPSATNPKYTQQGFNTAFRVVANDGQLGGVLGRYAVNELKAKNIAVIDDRTAYG
QGVAEEFRKSALAAGATIVATQYTTDKATDFNAILTSVKSKKPDLVFFGGMDAVAGPMLR
QMDQLGIAAKFMGGDGICTTELPGLAGAGLKDDQVVCAEAGGVTEAGKKPLEDFKAAYKK
KFNQEVVIYAPYTYDALMTLADAMQQAGSSDPKVYLPVLAKIHHKGVTGEIAFDPKGDIL
NGTLTLYTYKGGKRSLLSVVK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattaaaatgattcctgtcgctacagcactggtggcagcgttcgcattcgca
ggggctgcgcaggcacaagaagtcatcaagatcggtcacgtcgctcctctgaccggtccc
aatgcgcacatcggcaaggacaatgaaaacggtgcccgcatggccgtggacgaactcaat
gccaagggcttcatgatcgccggcaagaaggtcaccttccaactggtgccccaggacgac
gcttccgatccgaagcaagctaccaccgtggcccaggccctggtcgatgccaaggtcaag
ggcgtggtcggtcacatgaactccggtaccaccatcccggcttccaagatctactacgac
gccggcatcccgcagatctcgccgtcggcaaccaaccccaagtacacccaacaaggcttc
aacaccgccttccgcgtggtggccaacgatggccagctgggtggcgtgctgggtcgctat
gccgtcaatgaactcaaggccaagaacatcgccgtcatcgatgaccgtaccgcctacggc
caaggtgtggctgaagaattccgcaagagcgccctggctgccggtgccaccatcgtggct
acccagtacaccaccgacaaggcgaccgacttcaacgccatcctgacctcggtcaagtcc
aagaagccggacctggtcttcttcggcggtatggatgccgtggccggcccgatgctgcgc
cagatggaccaactgggcattgctgccaagttcatgggcggtgacggtatctgcaccacc
gaactgccgggcctggctggcgccggtctgaaggatgaccaggtggtctgtgctgaagcc
ggtggtgtgaccgaagctggcaagaagccgctggaggacttcaaggctgcctacaagaag
aagttcaaccaggaagtcgtgatctacgcaccgtatacctacgacgcgctgatgaccctg
gctgatgcgatgcaacaggctggctcgtcggatccgaaggtctacctgccggttctggcc
aagatccaccacaagggcgtgaccggcgagatcgccttcgatccgaagggcgacatcctc
aacggcaccctgaccctgtacacctacaagggtggcaagcgttcgctgctgagcgtggtg
aagtaa
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