Herbaspirillum rubrisubalbicans: Hrubri_0804
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Entry
Hrubri_0804 CDS
T04238
Name
(GenBank) hypothetical protein
KO
K26184
naringenin degradation protein FdeB
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00946
Degradation of flavonoids
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
Hrubri_0804
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GFIT
Motif
Pfam:
Peptidase_S9
FrsA-like
Hydrolase_4
Peptidase_S15
Abhydrolase_4
UPF0227
BD-FAE
Motif
Other DBs
NCBI-ProteinID:
ALU88021
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Position
920960..922120
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AA seq
386 aa
AA seq
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MFRYFPTNYVWNLSVDLAIEMGARIGEIEAMCAPLQEAAKQPDAEGTAAFRATWADMAEK
LCSLAAEDEVRGRLLSAGAKYKRAASYLLTCERLQGHGAPGRLELYRRFLEVFQRGITLA
GDNCERVEIPYEGKVISGLYTRAHNVQGPAPILVQLNGLDSTKEMKYLVGLPGWLAERGV
SSLVIDQPGTGEALRLQGLTARFDAEHWARHVVDWLEQRDDVDPTRIGCEGVSLGGYYCP
RVVAMEPRFACGVVWGANHDWRDVQKRRLEKEGDFPVPHYWQHVCWVWGAKDIDDFMRIA
EDVHLDGVVEKIRVPFLVTHGEKDSQIPLKWAHRTYEQLVNSPKRELKVFTDREGGAQHA
SFDNSINAGHVIADWVAETLGGRTKG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttccgttacttcccgacgaactatgtctggaatctttccgtcgatctcgccatcgag
atgggcgcccgcatcggcgaaatcgaagccatgtgcgcgcccttgcaggaggcggccaag
cagcctgacgctgaaggcactgcggcctttcgcgccacctgggcggacatggcagaaaag
ctgtgcagcctggccgccgaggatgaagtgcgcggccggctgctctcggccggcgccaag
tacaagcgcgcggccagctatctgctgacctgcgagcgcctgcagggtcatggcgcgccg
ggtcggctggagctgtaccggcgcttcctggaagtgttccagcgtggcatcactctggcc
ggcgacaactgcgaacgtgtcgaaattccttatgagggcaaggtcatctcggggctttat
acccgtgcccacaatgtgcaaggtccggcgccgatcctggtgcagctcaatggattggat
tccaccaaggaaatgaaatacctggtcggcctgccgggctggcttgccgagcgcggcgtt
tcctcgctggtgatcgaccagccgggcacaggtgaagctctgcgcctgcagggcctgacc
gcgcgcttcgatgccgagcactgggcccgtcacgtggtggactggctggaacagcgcgac
gacgtcgatcccacccgcatcggttgcgaaggcgtctccctgggcggctactactgcccg
cgcgtggtcgccatggaaccgcgttttgcctgtggcgtagtgtggggtgccaatcatgac
tggcgcgacgtgcagaagcgccgcctggaaaaggaaggcgatttcccggtgccgcattac
tggcagcacgtgtgctgggtgtggggcgccaaggacatcgacgacttcatgcgcattgcc
gaagacgtccatctggatggcgtggtcgagaagatccgcgtgcccttcctggtcacccat
ggcgagaaggatagccagattccgctcaagtgggcgcatcgcacctacgaacaactggtc
aacagccccaagcgcgaattgaaggtcttcacggatcgtgaaggcggcgcccagcacgcc
agtttcgacaactccatcaatgccggccacgtcatcgccgactgggtggccgagaccctg
ggtgggcgcaccaagggctga
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