Herbaspirillum rubrisubalbicans: Hrubri_0937
Help
Entry
Hrubri_0937 CDS
T04238
Name
(GenBank) dipeptide ABC transporter periplasmic peptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_0937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_0937
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hrubri_0937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALU88153
LinkDB
All DBs
Position
1102283..1103905
Genome browser
AA seq
540 aa
AA seq
DB search
MSKQENGLPPKEGCIITGDTLEHAHGGFTRRDMMRTLLAGSLMTVGGTGLLTASGNAMAQ
TGKRGGKLRMATQTSSTSDTLDPAKTGHATDYARVNMFYNGLTKLDGKLAPQMVLAEEMI
TTDAITWIVKLKKGVVFHDGKPLTPADVVYSIMRHKDPATASKVKVVADQFESVKATGPN
EVQIKLTSANADLPVILSTAQFLIVRDGTTNFSTANGTGAFKLKEFTPGVRTIAVRNENY
WKPGLPYLDEVELFGIPDEAARVNALLSGDVHWINDVNSRSTGRVKSTPGYTVMETKSGQ
YTDLVMRQDVAPGNNMDFTLGMKYLLDREQIKMAAFRGFAVIANDQPIDPTNRFYFAGLP
QRPYDPDKAKFHLQKAGVLGSTIPIVASVAATGSVDMAVLMQQSAAKIGLKLDVKRVPPD
GYWSNQWMKVPVGFGNINPRPSADILLTQFFKSDAQWNESGWKNPQFDQLVVAARGETDF
NKRKAMYADLQTMIHEKCGLGIPVFIINLEGISTKVKGIDPVPLGAFMNYTCAEYVWLDA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaggaaaacggactaccccccaaagagggctgcatcatcaccggcgatacg
ctggaacacgcgcacggcggcttcacccgccgcgacatgatgcgcaccctgttggccggt
agcctgatgacagtgggcggtaccggactgctcaccgccagtggcaatgccatggcgcag
accggcaagcgtggtggcaagctgcgcatggccacccagaccagttccacctccgatacc
ctggacccggccaagaccgggcacgctaccgactacgcccgggtaaacatgttctacaac
ggcctgaccaagctcgatggcaagctggccccgcagatggtgctggccgaggaaatgatc
accaccgacgccatcacctggatcgtcaaactgaagaagggcgtggtgttccacgatggc
aagcccttgaccccggctgacgtggtctattccatcatgcgccacaaggatccggcgacc
gcctccaaggtcaaggtggtggctgaccagttcgaatcggtcaaggccaccgggcccaac
gaagtccagatcaagctcaccagcgccaacgccgacctgccggtgatcctgtccaccgcg
cagttcctcatcgtgcgcgatggcaccaccaacttcagcaccgccaacggtaccggcgcc
ttcaagctcaaggaattcaccccgggcgtgcgtaccattgccgtgcgcaacgagaattac
tggaagccgggcctgccctacctggatgaagtcgaactgttcggcattcccgacgaagct
gcgcgcgtcaatgccttgctctccggcgacgttcactggatcaacgacgtcaattcccgt
tccaccggccgcgtcaagagcacgccgggctataccgtcatggaaaccaagtcgggccag
tacaccgacctggtgatgcgccaggacgtggcaccgggcaacaacatggacttcacgctg
ggcatgaagtatctgctggatcgcgaacagatcaagatggctgccttccgcggttttgcc
gtgatcgccaacgaccagccgatcgaccccaccaaccgcttctacttcgccggcctgccg
caacgtccctatgacccggacaaggccaagttccacctgcaaaaggctggcgtgctgggc
agcaccattcccatcgtggcctcggtggccgccaccggttcggtggacatggctgtgctg
atgcagcagagcgccgccaagatcggcctcaagcttgatgtcaagcgcgtgccgcccgat
ggctactggtccaaccaatggatgaaggtaccggtaggttttggcaacatcaacccgcgt
cccagcgccgacatcctgctgacccagttcttcaagtccgacgcccagtggaacgagtct
ggctggaagaatccgcagttcgaccagttggtggtggctgcccgcggcgagaccgacttc
aacaagcgcaaagccatgtatgccgacttgcagaccatgatccacgagaagtgcggtctg
ggcatcccggtattcatcatcaacctggaaggcatcagcaccaaggtcaagggcattgac
ccggtgccgctgggtgcgttcatgaactacacctgtgccgagtacgtctggctggacgcg
tga
DBGET
integrated database retrieval system
