Herbaspirillum rubrisubalbicans: Hrubri_0995
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Entry
Hrubri_0995 CDS
T04238
Symbol
livM
Name
(GenBank) ABC-type branched-chain amino acid transport system, permease component protein
KO
K01998
branched-chain amino acid transport system permease protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02010
ABC transporters
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Hrubri_0995 (livM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_0995 (livM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_0995 (livM)
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Hrubri_0995 (livM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF6720
Motif
Other DBs
NCBI-ProteinID:
ALU88211
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Position
1164004..1165218
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AA seq
404 aa
AA seq
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MALMTFDMKRNPRQAQLSLLALLALMIVFPIVAQQFGNSWVRIMDMALLYIMLALGLNVV
VGFAGLLDLGYIAFYAIGAYTAGLLASPQFAAVIESFINTYPSIGNFLVWLCGPQIVQNG
IHLSLWLIVPISGVLAAIFGALLGAPTLKLRGDYLAIVTLGFGEIIRIFMNNLNAPVNIT
NGPQGINLIDPIRVFGVSLAGEPGSGSMVKVLGMSLPSVNAYYYLFLVLCIFVIFFSTRL
QDSRLGRAWVAIREDEIAAKAMGINTRNVKLLAFAMGASFGGVAGAMFGAFQGFVSPESF
SLTESIAVLAMVVLGGIGHIPGVVLGGVILAALPEVLRHVVEPLQMAIFGRVWIDAEVLR
QLLYGLAMVVIMLTRPAGLWPSPRHEDRPEVDHTKVGTTGEVKA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatgaccttcgatatgaagcgcaatccccggcaggcacaactgagcctgctg
gcgctgttggcgctgatgatcgtcttccccatcgtcgcccagcagttcggcaattcctgg
gtgcgcatcatggatatggcgctgctctacatcatgctggccctgggcctgaacgtggtg
gtaggttttgccggcctgttggacctgggctatatcgccttctacgccatcggtgcctat
accgccggcttgctggcctcgccgcagttcgccgcggtgatcgagtccttcatcaacacc
tatccctccatcggcaatttcctggtgtggttgtgtggtccgcagatcgtgcagaacggt
atccacctctcgctgtggttgatcgtgccgatctcgggcgtgctggcagcgatcttcggt
gcgctcctgggtgcgccgaccctgaagctgcgcggtgactacctggccatcgtgacgctg
ggcttcggcgagatcatccgtatcttcatgaacaacctgaacgcgccggtcaacatcacc
aacggcccgcagggtatcaacctgatcgacccgattcgcgtctttggcgtgtcgctggcg
ggcgaaccgggttccggttcgatggtcaaggtgttgggcatgagcctgccctcggtcaat
gcctactactacctgttcctggtgctgtgcatcttcgtgatcttcttctccacgcgcctg
caggactcgcgcctgggtcgcgcctgggtggccatccgtgaagatgagatcgccgccaag
gcgatgggcatcaacacccgcaacgtcaagttgctggcctttgccatgggcgcgtccttc
ggtggcgtggccggcgccatgttcggcgccttccagggcttcgtctcgccggaatccttc
tccctgaccgaatccatcgccgtgctggccatggtggtgctgggcggtatcggtcacatc
cccggcgtggtgctgggtggcgtgatcctggccgcgctgccggaagtgctgcgccacgtg
gtggagccgctgcagatggccattttcggccgtgtgtggatcgatgccgaagtgctgcgc
cagctgctctacggcctggccatggtggtcatcatgctgacccgcccggccggcctgtgg
ccctcgccgcgccatgaagaccgtcccgaagtggaccataccaaagtcggtaccaccggc
gaagtcaaagcctaa
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