KEGG   Herbaspirillum rubrisubalbicans: Hrubri_1169
Entry
Hrubri_1169       CDS       T04238                                 
Symbol
vgr
Name
(GenBank) VGR-related type VI secretion system protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
hrb  Herbaspirillum rubrisubalbicans
Pathway
hrb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hrb00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Hrubri_1169 (vgr)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hrb02044]
    Hrubri_1169 (vgr)
Secretion system [BR:hrb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Hrubri_1169 (vgr)
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: ALU88381
LinkDB
Position
complement(1367083..1369581)
AA seq 832 aa
MAPSLQKASSRSQARIAQHDRLLKLDTPLEEDLLLPQRLVATDHLSHGYDYTIDLLATRS
DLDLKPLIAQAVTLWIRQDTRDYLPIHGYVHTAERLGSDGELAFCQLGIAPWLHFLRFRK
DARIWQDKTAEDILADVFDCHPQARGHYRFALERPALARSYCTQYETDWHFVQRLMEEEG
WFAHHEQKEDGSAHVLVITDNSYSLRPLARHAIAFHGAGPQDELDKILHWRAHRHLTSSR
WRSRTDDYKSPRQEKGAEEHVLPEHGQLPGQLEIYEYTGAYSHANQEQGNRQADLRVEQW
ESAMQRYHAISGVREIACGRWFRLDGHPEHKAAAESERQYMIIAIDWFIENNLPLSHQAL
DFPGSLSAVLAQFKASIGRAQKSEAADNQHTGHCFNRFEVQRRSLPFRSERTHPKPLLHP
QTAIVVGPGGEEVYTDHLNRIKVQFHWDRINPGNEAASCWVRVSYPNAGQYWGAINVPRI
GQEVIVSFLNGDPDRPVVTGRLFNEEQRPQWHSNGRLSGLKSKEFGGDGFNQLVMDDSHQ
QNRLHLYSSHTHARLDLGHLVHQVGNERRDFYGAGFALKSDAYGAIITHKGLYISTYGRP
GPQGAQLDATEATAQLKAGAALSKTLSDIAAKAGAQALPRQDGLNDFIRATQEPYDDPAQ
ALANRFKEPVLLAASPAGIGLTTPKGTHVHAGAEVTLSSGTDTHLAVGKSLLASVAEKIS
LFACQLGIKLFAAKGKVEVQAQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFI
QINSAGITQGTPGKWEAKASLHSMPGPARISYAMPLLPSSVWDIPRRYPFSQ
NT seq 2499 nt   +upstreamnt  +downstreamnt
atggctccctccttgcagaaagcttcatctcgttcccaggcgcgcattgcgcagcatgac
cggctactcaagctggatacccctctcgaagaagacctcctcctgccgcaacgcctggtc
gccaccgaccatctgagccacggctacgactacaccatcgatctgctggccacccgctcc
gacctcgacctcaaaccattgatcgcgcaagccgttacgctctggatcaggcaagacaca
cgcgactatctgccgatacatggctatgtccataccgcagaacgcctgggcagcgacggc
gaactcgccttctgccagctgggcattgctccctggctgcacttcctgcgctttcgcaag
gatgcccgcatctggcaagacaagaccgccgaagacatcctcgccgacgtcttcgattgc
catccccaggcccggggccattaccgtttcgcgctggagcgaccggcactggcccgctcc
tattgcacccagtacgaaaccgactggcatttcgtccagaggctgatggaagaagaaggc
tggtttgcccatcacgagcagaaggaagacggtagcgcacacgtcctggtcatcaccgac
aacagctatagcctgcgcccgcttgcccgccacgccatcgccttccacggcgccggtcca
caagacgaactcgacaagatcctgcactggcgcgcccatcgccatctcacctccagccgg
tggcgcagccgcaccgacgactacaaatccccccgccaagaaaaaggcgcagaagaacac
gtcctgcccgaacacggccagttgccgggccaattggaaatctacgaatacaccggcgcc
tacagccatgccaaccaggaacaaggcaaccgccaggccgacctgcgggtggaacagtgg
gagtcggccatgcagcgctaccatgccatctccggcgtgcgcgagatcgcctgcggacgc
tggttcaggctggatggccatcctgagcataaagccgcagccgagagcgagcggcagtac
atgatcatcgccatcgactggttcatcgagaacaacctgcccttgtcgcatcaggcgctg
gattttccgggcagcctgagcgctgtgctggcgcagttcaaggcatcgataggacgcgcg
cagaaaagtgaagcagcggacaaccagcacaccggtcactgcttcaatcgctttgaggtg
cagcggcgcagcctgccgtttcgcagtgagcgcacgcatcccaagccactcctgcatcca
cagacggccatcgtcgtggggccgggcggcgaagaggtctataccgatcacctcaatcgc
atcaaggtccagttccactgggaccggatcaatcccggcaatgaagccgcctcgtgctgg
gtgcgggtgagttaccccaatgccggccaatactggggcgccatcaacgtgccgcggata
ggacaggaagtcatcgtctccttcctcaacggcgatcctgatcgaccggtcgtgaccgga
cgtctcttcaatgaggagcagcggccgcaatggcacagcaatggtcggctctccggcctc
aagtccaaggagttcggaggagacggcttcaaccagttggtgatggatgacagccaccag
cagaaccgcctgcatctctacagcagccatacccatgcccggctcgatctgggccatctg
gtccaccaggtcggcaacgaacggcgtgacttctacggtgccggtttcgcgctcaagagc
gatgcctatggcgccatcatcacgcacaagggcttgtacatcagcacctatggacggccc
ggaccacaaggggcacaactggacgccaccgaagccacggcgcaactgaaggccggtgca
gcgttgagcaagaccttgtcggacatcgccgcgaaagccggcgcgcaagccctgccgcgg
caggatggcttgaatgacttcatccgtgccacgcaagagccatacgatgatccggcccag
gcgctggccaatcgtttcaaggagcccgtactgctggcggcatccccggccgggatcgga
ttgaccacacccaagggtacgcatgttcacgcaggcgctgaagtgaccttgtcgtcgggg
acggatacccatctcgccgtgggcaaaagcctgctcgccagcgtagctgagaagatcagc
ctgttcgcctgccagctcggtatcaagctctttgccgccaagggcaaggtggaagtgcaa
gcccagagtgatgacctggacttgattgccgagaaggtggcgcgcttgctctccaccagt
gggcgggtggaaatccatgccaaggatgaagtgatgatctcggctggcggctccttcatt
cagatcaacagtgccgggatcacccaaggcacgccgggcaagtgggaagccaaggcttcc
ttgcattcgatgccgggaccggcgcgcatctcctatgcgatgcccttgctgccctcgagc
gtctgggacatacccagacgttatcccttctcgcaataa

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