Herbaspirillum rubrisubalbicans: Hrubri_1269
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Entry
Hrubri_1269 CDS
T04238
Name
(GenBank) aspartyl/asparaginyl beta-hydroxylase protein
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hrubri_1269
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Hrubri_1269
Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Lipid A
Hrubri_1269
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ALU88481
LinkDB
All DBs
Position
complement(1496925..1497824)
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AA seq
299 aa
AA seq
DB search
MKWAIVFIYLFSILFIHFRGRVRLPFLRQFFDHSSIMSPINLFMYAFSRVPAVPYPAVKE
FQDLAIIDQNWEVIRDEAVALREMAKIKAAEKNDDAGFNSFFKAGWKRFYLKWYNASHPS
AEKFCPKTVEILKRIPSVKAAMFAELAPGGTLNRHRDPFAGSLRYHLGLVTPNDDRCFIE
VDGQRYSWRDGQSVVFDETFIHWAQNGTETNRIILFCDVERPLRYRWAEAINGFLGRTMM
TAASSPNETGDQTGRVNKLFRFVWLAGQYRRRFKNWNKTVYKITKFSLIIAVALLIIYA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggctattgtcttcatatatctgttttccatcctcttcatccacttccgtggc
cgcgtgcgtctgcccttcctgcggcagttcttcgaccattcgtcgatcatgtcgcccatc
aacctgttcatgtacgccttctcgcgcgtaccggccgtgccctacccggcggtcaaggag
ttccaggacctggccatcatcgaccagaactgggaagtgatccgcgatgaagccgtggcc
ctgcgcgagatggccaagatcaaggccgcagaaaagaatgatgatgccggcttcaactcc
ttcttcaaggccggctggaagcgcttctatctgaagtggtacaacgccagccacccctcg
gctgaaaagttctgccccaagacggtcgagatcctcaaacgcattcccagcgtcaaggcc
gccatgtttgctgaactcgccccgggcggcaccctcaatcgccaccgcgatccctttgcc
ggttcgctgcgctaccatctgggcctggtcactcccaacgatgatcgctgcttcatcgaa
gtcgatggccagcgctatagctggcgcgatggccagagcgtggtgttcgatgagaccttc
atccactgggcgcagaacggcaccgagacgaaccgtatcatcctcttctgcgacgtcgag
cgtccgctgcgctatcgctgggccgaagccatcaatggtttcctggggcgcaccatgatg
accgcggcgtcctcgcccaatgaaaccggcgaccagaccggacgcgtcaacaagctgttc
cgcttcgtctggctggccggccagtatcgccgccgcttcaagaactggaacaagacggtc
tacaagatcaccaagttcagtctcatcatcgccgtggccctgctgatcatctacgcttga
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