Herbaspirillum rubrisubalbicans: Hrubri_1377
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Entry
Hrubri_1377 CDS
T04238
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Hrubri_1377
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_1377
Transporters [BR:
hrb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Hrubri_1377
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALU88588
LinkDB
All DBs
Position
1620103..1621650
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AA seq
515 aa
AA seq
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MLALLAAGTAPLAWAHGDEASHAHPISPGGRDMLTVVGPWELTGLDPARSGYMFARMEVL
QTLLEVDDAGQLRPALARTWEVSADGLQWRFALQAGRRYHDGSVVTPASVLACLQRAAVR
PGVLQLASITAMSVQESVLVVSLSKPFGPLPYLLTHYSTQILAPSSFDAHGNVVAIVGSG
PFRIQSISLPQQFDVERVAPGPDKAIQRARYISVSRAETRTLLVQSGQAELAFSLDPPSI
RALQESPRARLLSAMLPRTTILKLNAGHPFLADVRVRRAISLCMEREGIARALLRDPDLG
ATQLFPPSLTRWHDPQLAPLHTDLKQARRLLEEAGWRLGADGVRWRDGRKLELSLTTFVD
RPELPLIATALQEEMRQIGIAVRVVIGNSSDIPAGHRSGALQMALAARNYGNLPEPVASL
LQDFGPQGGDWGAMGWDNTEVPALLARLAQLPAMPAGGADSGRAERARIVALLQEQLPVI
PVVWYRQTCAVSRRLQGASLDPFERSYRLSYLQWI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctgctggccgctggtaccgcgccgctggcctgggcgcatggcgatgaggcc
agccatgcccaccccatcagcccgggtggccgcgacatgctgaccgtggtcggcccctgg
gaattgaccgggctcgatccggcgcgctccggctatatgttcgcccgcatggaggtgctg
cagaccttgctggaggtggacgacgccggccagttgcgcccggcgctggcgcgcacctgg
gaggtcagcgccgatggcttgcaatggcgctttgccttgcaggccgggcgtcgctaccac
gatggcagtgtcgtcacgccggccagcgtactggcctgtctgcagcgcgctgccgtgcgg
ccaggtgtactgcaactggcgagtatcacggccatgagtgtgcaggaaagtgtactggta
gtgagcctgagcaagcccttcggcccgttgccctatctgctgacccattattcgacccag
atcctggcgccatcttccttcgatgcgcacggcaacgtggtggccatcgtcggtagcggg
ccgttccgcattcaatccatcagcctgccgcagcagttcgatgtggagcgggtggcgccg
gggccggacaaggcgatccagcgggcgcgctatatcagcgtctcgcgcgcagagacgcgc
acgctgctggtccagagcggccaggctgaactggctttttcgctggacccgcccagcatc
cgcgccctgcaggagagtccgcgtgcgcgcctgctctcggccatgctgccgcgcacgacc
attctcaagctcaatgccggccatcccttcctggccgacgtgcgggtgcgccgcgccatc
tccttgtgcatggagcgcgagggcatcgcacgcgcgctgttgcgcgatcccgacctgggc
gcgacccagctctttccgccgtcgctcacacgctggcacgatccccagctagcgcccctg
cataccgacctcaagcaggcgcgccgtctgctggaagaggccggctggcgcctgggcgcc
gatggcgtgcgctggcgcgatgggcgcaagctggaactgagcctgaccaccttcgtcgat
cggcccgaattgcccttgattgccactgccttgcaggaagagatgcgccagatcggcatt
gccgtgcgggtggtgatcggcaactccagcgacatcccggccggccatcgcagcggcgca
ttgcagatggcgctggcggcgcgcaattacggcaacctgcccgagccggtggccagcctc
ttgcaggacttcgggccgcaaggcggcgactggggcgccatgggctgggacaataccgag
gtgccggcgctgctggcgcggctggcgcagttgccggccatgcccgccgggggtgccgac
agcgggcgcgccgagcgcgcccgtatcgtggcgctgctgcaggaacagttgccggtgatc
ccggtggtctggtatcgccagacctgtgccgtcagccgtcgcttgcagggcgccagcctc
gatccttttgaacgtagttatcgtctctcttacctgcaatggatctga
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