Herbaspirillum rubrisubalbicans: Hrubri_1498
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Entry
Hrubri_1498 CDS
T04238
Symbol
soxR
Name
(GenBank) Cu(I)-responsive transcriptional regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrb03000
]
Hrubri_1498 (soxR)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
hrb01504
]
Hrubri_1498 (soxR)
Transcription factors [BR:
hrb03000
]
Prokaryotic type
Helix-turn-helix
MerR family
Hrubri_1498 (soxR)
Antimicrobial resistance genes [BR:
hrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
Hrubri_1498 (soxR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR_1
MerR
DUF3723
Motif
Other DBs
NCBI-ProteinID:
ALU88707
LinkDB
All DBs
Position
complement(1753657..1754079)
Genome browser
AA seq
140 aa
AA seq
DB search
MNIGEAASASGVSAKMIRHYEETGLIPKAGRTDAGYRVYGQRDVHLLRFVRQARQLGFSM
AQVSDLIGLWLDQSRPSRKVKQLAQTHIGELDQRIHELQTMKATLERLVQDCHGDHRPDC
PILDALGAEQDCCSPAGTPS
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcggtgaagccgccagcgcctcgggcgtctcggccaagatgatccgccattat
gaagaaaccggcctgatccccaaggccggccgtaccgatgccggctaccgcgtctatggc
cagcgcgacgtgcatctcttgcgcttcgtgcggcaggcgcgccagttgggcttttccatg
gcgcaggtgagtgacctgatcgggctgtggctggaccagtcgcgtcccagccgcaaggtc
aagcaactggcgcagacccacatcggcgagctggaccagcgcatccacgaattgcagacc
atgaaggccacgctggaacggctggtgcaagactgccacggcgaccaccggcccgactgc
cccatcctcgatgcgctgggggcagagcaggattgctgttctcccgcaggaacgccctca
tga
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