Herbaspirillum rubrisubalbicans: Hrubri_1561
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Entry
Hrubri_1561 CDS
T04238
Name
(GenBank) filamentous hemagglutinin outer membrane protein
KO
K15125
filamentous hemagglutinin
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrb00536
]
Hrubri_1561
Glycosaminoglycan binding proteins [BR:
hrb00536
]
Heparan sulfate / Heparin
Microbial pathogens
Hrubri_1561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
CdiA_C
CSD
Motif
Other DBs
NCBI-ProteinID:
ALU88770
LinkDB
All DBs
Position
1824884..1829191
Genome browser
AA seq
1435 aa
AA seq
DB search
MLRQLGQLNQPNAAIGVRQLGDGFYEQQLVQRQIQQITGQRYLAGYSSNEAQYQALMNAG
LQVAQAQRYTVGVALTDAQVAALKTDIVWLVKQTVTLADGSTQEVLVPQVYVHASNVEVT
GQGTLIAGNDVAFQAAQDIVNSGGTIAARKGVSLAGANLQNLGGRISGADVQVAAAQDIN
NIGGTIDARNTLVATAGRDINSASTTVATANAVTSGTNINQNASMSVSEANGSLTAVAGR
DINLKASGTSADNVTLVAQRDVNLATVHETSQEKLAWDNDNRAEVNRDNAIGSTVQGKDI
SVTAGRDINAQAVYVNAEGSLAANAGNNVNIGTDVSTANARDQHKKTDAGGVLSSRTVTT
DDSSSERINQGTTLSGNTVVVRAGKDINVTGSNVVATQGLGMAAGNDVNIVAAVDSSTKN
NFRKETTSGVMGAGFGVTIGTREQSHDGKSQGQTASASTIGSTDGNVSIVAGNRYTQVGS
DVMAPKGDIDIAAKSVEIRAAEQASRTETEDKYKQSGLTVAVTSPVISAMQTVDQMVESS
GKTKNGRVKALAAATAGMSLYSAAGEMQKAGSAEGGSNIGISATIGSSQNGSRSEQNTVT
QRGSTVASGGNMSIRATGDGANSNITIAGSDINAKGNLALKADNDINLIAAQNSDEQHST
RSSSSWGVGITAQIGSQSKLGITANAAGSRGKSDGKDVSNVMTQVRSGGQIKIDSGRDTN
LIGATVSGEQVQANVGRDLNIASVQDTSTFKSRDQSIGGSATIGYGSSASISASRSRVDA
DYASVGQQAGIMAGNGGFQINVKGNTDLKGAQIASTDQAVEQGRNSLTTGTLTSSDIQNR
SQYSAESQSASAGTSGGKPGGGIGIGNASGSETSVTRSGVSGAAVTITDAQAQQARTGQS
ADQAVASLDTSVRTGKDSSNSLAKNWDGNQLREDVEAQAKITQAFGQQAAKAIGDYAGTK
QRELEQAAKTASLEGDETSAANLRTEAAKWSEGGEYRVGAHTAIGLLGGGVGGALGAAAS
ASLMPDIAKQIEKLKLPPALETAVSLAAAAGIGAAVGGDAGAASAYNVDLNNRILHKEEP
AALNRLAKGKTQEEQKRLVDAVCALTHCSAGIPDNDPMKAVLTASEQRGQNYMLEQSQLK
SEGLFTYGSIDRLVDILTRYQVSNRSVGAVQGVSSTALGVTAIGASCSTVLACGLGAVVG
GTALDYGYAGFKQLWAGDIVPTYGEQVLQSFGLSPTMAALLYGGINIAATGGSSWVSQAG
KIPEAKLVSPPNSVPIKGPGGGASLADDNLFNLTERELVPSTSGSLIGKFEVAPKNAPVD
QLRSIQRQNEAAETLSKSGLQVENLPNTGRPGANPDLKINGELADVYAPTTGNPKSIRDK
IIEKVNTQAPTVVVNLADSPLTASDVAQYIQRNPVGNMKSLFIMKSGKVYFLEAK
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcaactgggccaactcaaccaacccaatgccgccatcggcgtgcgtcagttg
ggcgatggtttctatgaacagcaactggtgcagcgccagatccagcagatcaccggccag
cgctatctggccggctacagcagcaacgaagcgcaataccaggcgctcatgaacgctggc
ctgcaagtggcgcaagcccagcgctacacggtgggagtcgccctgaccgatgcgcaggtg
gcggcactgaagaccgacatcgtctggctggtcaagcaaacggtgacgctggccgacggc
agcacgcaggaagtgctggtgccgcaggtgtacgtacacgcctccaacgtcgaggtgacc
ggccagggcacgttgattgcgggcaatgatgtggccttccaggcggcgcaggatatcgtc
aacagcggcggcactattgctgcgcgcaagggtgtttcgctggccggcgccaatctccag
aacctggggggacgtatctctggcgcggatgtgcaggtggcggcagcgcaggacatcaac
aacatcggcggcaccatcgatgcccgcaacacattggtggccacagcaggtcgcgacatc
aacagcgcttccaccacggtagcaacggccaacgctgtcaccagcggcaccaacatcaac
cagaatgcctcgatgtcagtctccgaggccaatggttcgctgactgccgtggccggtcgt
gacatcaacctcaaggccagcggcacctccgctgacaacgtcacgctggtcgcccagcgc
gatgtgaatctcgccaccgtccacgaaaccagccaggaaaaactcgcctgggacaacgac
aaccgcgccgaagtcaaccgcgacaacgccatcggcagcacggtgcagggcaaggacatc
agcgtgaccgcaggtcgcgacatcaacgcccaggcagtctacgtcaacgccgaaggctcg
ttggcggctaacgcaggcaacaacgtcaacatcggcaccgatgtcagcacggccaatgcg
cgtgatcagcataagaagaccgatgcgggtggggtgctgtcttcgcgtacggtgaccact
gatgacagcagcagcgagcgcatcaatcaaggcacgaccctgtctggcaatacggtggtg
gtgcgggcgggcaaggacatcaacgttactggcagcaatgtcgttgccacgcaaggcttg
ggcatggctgcgggtaacgatgtcaatattgtggctgccgtggatagcagcactaaaaac
aatttccgcaaggagaccaccagcggagtgatgggcgcaggcttcggcgtgaccataggc
acgcgtgagcagagtcatgacgggaagagccagggacagacggcgtcggcttccaccatt
ggcagcacggatggcaatgtcagcatcgtggcgggcaatcgttatacgcaggtgggtagt
gatgtgatggcgcccaagggggatatcgatattgcggccaagtcggtggagattcgtgcc
gcagagcaggcgagccgcacggagactgaagacaagtacaagcaaagtggcctgacagtg
gctgtcaccagcccggtgatctcggcgatgcaaacagtggaccagatggtcgaatcgtcg
ggcaagaccaagaatggtcgtgtgaaagccctggcggcagccaccgccggtatgtcactc
tacagcgccgccggagagatgcaaaaggccggctcggccgaaggtggcagcaacatcggc
atcagcgccacgataggcagcagccagaatggcagccgcagcgaacagaacacggtgaca
caacgcggctccacggtggcctctggcggcaacatgagcatccgtgcaaccggtgatggc
gctaacagcaacatcaccattgccggcagcgacatcaatgccaagggcaatctggcgctg
aaggcggacaacgacatcaacctcatcgcggcgcagaacagtgacgaacaacacagcacg
cgttcatcgtcgtcatggggcgtgggtattacggcgcagatcggttcacagagcaaactc
ggcatcacagccaatgcagcgggtagccgaggcaagagtgatggcaaggatgtgtccaat
gtgatgacgcaggttcgatccggtggtcagatcaagatcgattcgggccgtgatacgaat
ctgattggcgccactgtgtcgggggaacaggtgcaggccaacgttgggcgtgacctgaac
attgccagcgtgcaggacaccagcaccttcaagagccgtgaccagagcattggtggcagt
gcgacgatagggtatggatcgagcgccagcatcagcgccagccgcagccgtgtcgatgcg
gactatgcgagcgtggggcagcaagccgggatcatggcgggcaatggtgggttccagatc
aacgtgaagggcaatacggatctgaagggcgcgcagattgccagcacggatcaggcggtg
gagcagggcagaaatagcctgaccacgggaacacttaccagcagtgatatccagaatcgg
agccagtactcggcggagagtcaaagtgccagtgcgggtacgtcaggtggcaagccaggc
ggaggtattggcatcggaaacgcctctggtagcgagaccagcgtgacgcgaagtggtgtg
tcgggcgcggcagtgactattacggatgcgcaggcgcagcaggccaggaccgggcagagt
gcggatcaggcggtggcgtcgctggatacgtccgtgcgcacgggcaaggacagcagcaat
agtttggcgaagaactgggacggcaatcaactgcgtgaggatgttgaggcgcaggcgaag
attacgcaggcgtttgggcagcaggcggctaaagcgattggtgactatgcgggcaccaag
cagcgagagcttgaacaggccgcaaagacagcttcgctagaaggtgatgaaacatcggcg
gctaacttgcgtaccgaagcggccaagtggtcggagggcggcgagtaccgtgtaggtgct
cacactgcgattggcttgttgggtggaggcgttggcggcgcattgggtgccgcagccagc
gctagtttgatgccggatattgccaagcagattgaaaagttaaaactgccaccagcattg
gaaactgcggtgtcgctggcagcagcggcaggaattggcgcagcagtgggaggtgatgct
ggtgcggctagcgcctataacgttgatctgaataatcgaatactgcataaagaggagcct
gctgcgttaaatcgtctcgcgaaagggaagacgcaagaggagcagaaaagattggttgat
gcagtatgcgcgttgactcattgctcggcgggtattcctgacaatgatccgatgaaggcc
gtgctgacagcttcagaacagcgaggacagaattacatgctggagcagtcgcagctaaag
agcgaaggcctctttacctacggatcgatagatcgactcgtggatatcctcacgcgctac
caagtttcaaaccgctcggtaggagccgtccagggagtttcatccactgcgttgggtgta
acagccattggggcgagctgctctactgtcttagcttgtgggctaggtgcagtcgtagga
ggaactgcactagattacggttatgccgggttcaagcagttgtgggcgggggacattgtt
ccgacatatggcgaacaggttttgcaaagtttcgggctcagtcctaccatggctgcactt
ctgtatggcggtatcaatattgcggccacgggcggttcttcttgggtaagtcaagcgggt
aagataccggaggccaaactggtatctcctccgaactctgttccaataaaggggcctgga
ggcggtgccagtttggcggatgataatttgttcaatctgacggaaagagagctcgtcccg
agcacatcgggttcgttgatcggtaaatttgaagttgctccgaaaaatgcacctgtagat
cagttgcgctcgattcagaggcaaaatgaagctgcagaaacgctatcgaaatccggtctg
caagtcgaaaatttgcctaacacgggacgaccgggagcaaatccggatctgaaaattaat
ggtgaattggcagacgtctacgcaccgactacaggaaatccgaagtccatcagggataag
attattgaaaaggtgaacacacaggcgccgactgttgtggtgaacttggcggactctcct
ctaacagcctcagacgttgctcagtacattcagcgtaatccagtcggtaatatgaagtcc
ttgttcatcatgaaaagtgggaaagtttatttcttggaggccaaataa
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