Herbaspirillum rubrisubalbicans: Hrubri_1680
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Entry
Hrubri_1680 CDS
T04238
Name
(GenBank) hypothetical protein
Organism
hrb
Herbaspirillum rubrisubalbicans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ALU88885
LinkDB
All DBs
Position
1946536..1954566
Genome browser
AA seq
2676 aa
AA seq
DB search
MATASPSQANSADKVTGPVRVVMPDQAGSFQINANRAAVQHVQVVDVDLVLHMADGTKVV
LAGGAMEAMDDKSKVKFADTSAATGKLLDTVGKIALKPNDQSRVLNSDPVASAPNVAPAQ
QVTIDRNSASVGSDGSTQFAQIISDNSASLTSTSGTGKTANSTGPLTAGDTSHPTTTTAA
AAAASQSQPSSQSVFAQSTNPNANDAPIKQVEPQLPPERPGSIPTPQILPDPSQPAMTVK
LVNLTTITQSGDALFGSGGIPVSATDAGLPLQFSTQVINAGNDVHTIYAAGNNAGTFIKV
FDVNITGNGSVVSVIVSGVPSNMSIVNGTDLGGGRFQMTVAAGQTDFPLQLQYSTVEANP
SSPVHQAFDLTFTTTVSTSRGPQTLTDVRHVAVKDASVYGDLSYLDPATGDPVLVLPAQG
LPHEVHAGDGGVTIYGSNANDLLYGGAGNDILHGGTGNTFFQGGAGADQLLGGVNSTGTN
VNTASYAGSSAGVTVNLVTGLGSGGDAQGDQLSNIQNLRGSAFDDTFVANAVVNRLDGGS
GGSDTVSYAGSTAAVTVNLVTGTGTGGYAQGDTYTHIQNVIGSDFNDIFVASGDANRFDG
GLGSNTVSYVNSNAGVNVNLQSGVGSGGAAAGDTYVRIQNVIGTAYNDTFVGSADANSFD
GGSGGSDTVSYAGSTAGVSINFVSGRGTGGYAEGDSYNHIQNAIGSAFDDVFIAGVDSVH
FDGGSGGSDTVNYGASTGAVTVNMITMSGSGGYAQNNTYTNIQNIVGSSYSDTFIASAAA
NNFNGGLGGSDTVSYANSNAAVTVDLTHTDGTGTSGGYAQGDVLAHIQNLIGSAYNDTFI
ASADVNNFNGGGGSNTVSYIFSTGGVTVDLTNAIGTGTGGYYAAGDSFSNIQNLIGSAYD
DTFVASADANTFDGAGSNHNRVSYAASTTAVTVDLNYTDGTGTSGGYAQGDKLSNIQDLT
GGSGNDTFVASAVANNFDGGAGSNRVSYAASNAAVTVDLVLGSGSGGYADNDTYVNIQNV
TGSAYDDTFIASLAANDFVGGAGTNTVSYAKASDGNGVTVDLYHGQGSAGFAGGDTYSGI
QNVIGSAYDDTFIADNNHNVLDGGLGSNTVSYAFSTAAVTVNLVNGTGTGGFADGDTYLN
IQNVVGSALDDLIIASNQANSIDGGSSTASSHNRVSYASSNAAVTVDLNYTNGTGTSGGY
AAGDKLANIQDLTGSIYDDTFVASAAANNFDGGTSTASSHNRVSYASSNAAVTVDLNYTN
GTGTSGGYAAGDTLTNIQDLTGSSFDDVFVASAAANNFDGGASTASSHNRVSYASSNAGV
TVDLNYTDGTGTSGGYAAGDTLTNIQDLTGSNYDDTFVASAVANHFDGGGGNNTVSYARA
NDGNGVTVDLFQRVGSNGFAAGDQYTNIQNVIGSNYDDLFIADNNANSFAGGAGSNTVSY
VNSTAAVTVNLANGSGSGGFAQGDSYSSIQNVIGSSFDDTILASSDANLIDGGSSTASSH
NRVSYASSNAAVTVDLNYTDGTGTSGGYAAGDKLSNIQDLTGSSFDDTFVASAAANNFDG
GTSTASSHNRVSYASSNAAVTVDLNYTDGTGTSGGYAAGDTLTNIQDLTGSSFDDTFVAS
AAANRFDGGTSTSSSHNRVSYASSTAGVVVDLNSTDGTGTSGGYAAGDTLVNIQDLTGSN
YDDTFVASAVANNFDGGGGNNTVSYARANDGNGVTVDLFQRVGSNGFAAGDQYTNIQNVI
GSNYDDLFIADNNANSFAGGTGSNTVSYVNSTAAVTVNLANGSGSGGFAQGDSYSSIQNV
IGSAFDDTILASSDANVIDGGSSTSSSHNRVSYASSNAAVTVDLNYTDGTGTSGGYAAGD
KLSNIQDLTGSSFDDTFVASAAANNFDGGTSTASSHNRVSYASSNAAVTVDLNYTDGTGT
SGGYAAGDTLTNIQDLTGSSYDDTFVASAAANRFDGGASTSSSHNRVSYASSNAAVTVDL
NYTNGTGTSGGYAAGDTLINIQDLTGSNYDDTFVASAAANFLEGGGGSNTVSYARSTSSN
NSTGVTVDLSAGSGSGNYAQGDSYSNIQNVIGSDWADTLTGFATPGVTSVLTGGKGADNL
IANAANRADTYASYAGSSAGVTINLQAGSGSGGDAQGDVLTNIDNVIGSSNNDTFLASAN
ANKFNGEAGSDTVNYSLSSSADGTNGVTVDLSAGSGSGNYAQGDTYINIENVVGSAYNDT
ITGFATTGTRSVLEGGAGADTITAVNGNRASTFASYAGSGSAVTIDLKNGSGSGGDAQGD
VLVNIDNVIGSAYNDLFKASTQANNFNGGSGGVDTVSYEYDTGGVTVDLTNTLAATGTYA
AGDTFTNIANLTGGSGNDTFYASSVANSFDGGGGTNTVNYARSGSTPVVVDLYHGSGSGG
YAAGDTYANIQNVTGSAGSDTFYANSATNVFNGGAGGSDTVSYLYSTGNDITASLVSGGS
GGDASGDSYVGISNLEGSANVNSTLTGNSGANVLTARGNNTTNSLSGGGASSGTDVFNVV
EGGHNSVSVGSGSNLINVSAGANSSAGAQSDMVNQNTGNANIDSINGGAGVTTLHFADLG
SQLQLSNFASKITGITTLDVSAGNSTNIIITADDVRQMGMAGSGSSKILTVKMSTSESLQ
IMANGSDHYVYFPGTTDYAFYNSSNQEIARIHLVTA
NT seq
8031 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcaagcccatcacaagcgaactccgcggacaaggtaactggcccggtacgg
gtggtcatgccggaccaggccggcagcttccagatcaacgccaaccgagcggcagtacag
cacgtgcaggtggtcgatgtggacctggtgctgcacatggccgatggcaccaaggtggtg
ctggccggtggcgccatggaagccatggatgacaagtccaaggtcaagtttgccgacacc
agtgccgccaccggcaagctgctcgacaccgtgggcaagatcgcgctcaagcccaatgac
cagtcgcgcgtgctcaattccgacccggtggcctcggcccccaatgtggcgccggcccag
caggtgacgatagaccgtaactcggccagtgtgggcagtgacggcagtacccagttcgcc
cagatcatcagtgacaattcggcctcgctgaccagtaccagcggtaccggcaagaccgcc
aattccaccggcccgctcaccgccggtgacaccagtcatcccaccaccaccacggccgcc
gccgctgcggcctcgcaaagccagccgtcctcgcaatcggtctttgcgcagagcaccaat
cccaacgccaacgatgcgccgatcaaacaggtcgagccacaactgccaccggagcgcccg
ggctccatccctacgccgcagatcctgcccgatccttcgcagccggccatgaccgtcaag
ctggtcaacctgaccaccatcacccagagcggggacgccctctttggcagcggcggcatc
ccggtctcggccaccgatgctggcctgccgctgcagttcagcacccaggtcatcaatgcc
ggcaatgacgtacataccatctatgcggctggcaacaacgctggcaccttcatcaaggtg
ttcgacgtcaacatcaccggcaatggctcggtggtttcggtgatcgtctcgggtgtgccc
agcaacatgagcatcgtcaacggcaccgatctcggcggcggacgcttccagatgacggtc
gctgccggtcagaccgacttcccattacagttgcagtacagtacggtagaagccaatcct
tcttcaccggtacaccaggcttttgacctgactttcaccaccaccgtttccacctcgcgc
ggaccgcagaccctgaccgacgtgcgccatgtggccgtcaaggatgccagcgtgtatggc
gacctgagctatctcgacccggccaccggcgacccggtgctggtgttgccggcccagggc
ttgccgcacgaagtccatgccggtgatggcggcgtgaccatctacggcagcaatgccaat
gacctgctctatggtggtgccggcaacgacatcctccatggtggcaccggcaataccttc
ttccagggcggggccggcgccgaccagttgctgggtggtgtcaacagcaccggcaccaac
gtcaataccgccagctacgccggctcttctgcgggcgtgacggtgaacttggtgaccggg
cttggtagcggcggcgacgcccagggcgaccagctctccaacatccagaacctgcgcggc
agcgcctttgacgataccttcgtggccaatgcggtagtcaatcgcctcgatggcggcagc
ggcggctctgatacggtctcctatgccggctcgacggcggccgtgacggtcaacctggtg
accggcaccggcacgggcggctatgcccagggcgatacctatacccatatccagaacgtc
atcggcagcgacttcaacgatatcttcgtcgccagtggcgacgccaaccgcttcgatggc
gggctgggttccaatacggtgtcctatgtcaactccaacgccggcgtcaacgtcaacctg
caaagcggagtgggcagtggtggcgcggcagcgggggatacctatgtgcgcatccagaac
gtcatcggtaccgcctacaacgataccttcgtgggcagcgccgatgccaacagtttcgac
ggcggcagcggtggcagcgatacggtgagctatgcgggttcgaccgcgggcgtgtcgatc
aacttcgtctccggacgcggcacgggcggctatgccgagggcgacagctacaaccacatc
cagaatgccatcggctcggccttcgatgacgtcttcatcgccggtgtggacagcgtgcat
ttcgatggcggtagcggtggttccgacacggtgaactacggggcctccacgggtgcggtc
acggtgaacatgatcaccatgagcggcagcggtggctatgcccagaacaatacctatacc
aacatccagaacatcgtcggcagttcctattccgacaccttcatcgccagtgccgccgcc
aacaatttcaacggtggcctgggcggttcggatacggtcagctatgccaattccaatgcc
gccgtcacggtcgacctgacccatacggatggcaccggcacctctggcggttatgcccag
ggcgacgtgctggcgcacatccagaacctcatcggcagcgcctacaacgacaccttcatt
gccagcgccgacgtcaacaacttcaacggcggcggcggctccaatacggtcagctacatt
ttctcgaccggtggcgtgacggtcgatctcaccaatgccatcggcaccggtaccggcggc
tactatgcggcgggcgactccttcagcaacatccagaacctgatcggcagcgcctacgac
gacaccttcgtcgccagcgccgacgccaacaccttcgatggcgccggttccaatcacaac
cgggtcagctatgccgcctccaccacggcggtgacggtggacctgaattacaccgacggc
accggtacctcgggcggctacgcccagggcgacaagctctccaacattcaggacctcacc
ggcggcagcggcaacgacaccttcgtggccagtgccgtggccaacaacttcgatggtggc
gccggctccaaccgggtcagctatgccgcctccaatgccgcagtgacggtagacctggtg
ctgggcagcggcagcggcggctatgccgacaacgatacctacgtcaacatccagaacgtc
accggcagcgcctacgacgacaccttcatcgccagcctggctgccaacgacttcgtcggt
ggcgccggcaccaacaccgtgagctacgccaaggccagcgacggcaatggcgttacggtc
gacttgtaccatggacagggcagtgcgggctttgctggaggcgatacctacagcggcatc
cagaacgtgatcggttcggcctacgatgacaccttcatcgccgataacaaccacaacgtc
ctcgacggcggcctgggctccaataccgtcagctatgcgttctcgacggcggccgtgacg
gtcaacctggtcaacggcaccggcacgggcggctttgccgatggcgacacctacctcaac
atccagaatgtggtcggctccgccctggatgacctgatcatcgccagcaatcaggccaac
agcatcgacggcggcagcagcaccgccagttcgcacaaccgggtcagctatgccagctcc
aatgcggccgtcacggtggacctgaactacaccaacggcaccggtacctcgggtggttac
gcggccggtgacaagctggccaacatccaggatctgacgggcagcatctacgacgatacc
ttcgtggccagtgctgcagccaacaacttcgacggtggcaccagcaccgccagttctcac
aatcgggtcagctatgccagctcgaatgctgccgtcacggtggacctgaactacaccaac
ggtaccggcacctcgggcggctatgcggcgggagacacgctgaccaacatccaggacctg
accggcagcagcttcgacgatgtgttcgtggccagcgctgcggccaataacttcgatggc
ggcgccagcaccgccagttcgcacaaccgggtcagctatgccagctccaacgctggcgtc
acggtcgatctgaactacacggacggcaccggcacctccggtggttatgccgctggcgat
accctgaccaacatccaggacctgaccggcagcaactacgacgataccttcgtggccagt
gctgtggccaaccatttcgatggtggcggtggcaacaacaccgtcagctatgcccgtgcc
aatgatggcaacggcgtcacggtggacctgttccagcgggtgggcagcaatggctttgcc
gcaggcgatcagtacaccaacatccagaacgtcatcggcagcaactacgacgatctcttc
atcgccgacaacaacgccaacagctttgccgggggcgcggggtcgaacacggtgagctac
gtcaattccacagcggcggtgacggtcaacctggccaacggttcgggtagcggcggtttc
gcccagggcgacagctatagcagcatccagaacgtcatcggttcttcctttgacgacacc
atcctcgccagcagtgatgccaacctcatcgatggcggcagcagcaccgccagttcgcac
aaccgggtcagctatgccagctccaacgccgccgtcacggtggacctgaactacaccgat
ggcaccggcacctcgggtggctatgcggcgggcgacaagctctccaacatccaggacctg
accggcagcagctttgacgataccttcgtggccagtgccgccgccaacaatttcgatggt
ggcaccagcaccgccagttcgcacaaccgcgtcagctatgccagttccaatgccgccgtc
acggtcgacctgaactacaccgatggcaccggcacctcgggcggctatgcggcgggcgac
acgctgaccaacatccaggatctgaccggcagcagcttcgacgataccttcgtggccagc
gctgcggccaaccgcttcgacggtggcaccagcacgtccagttcgcacaaccgggtcagt
tatgccagttcgacggccggcgtggtggtggacctgaattcgaccgatggcaccggtacg
tccggtggttatgcggcgggcgacaccctggtcaacatccaggatctgaccggcagcaac
tacgacgataccttcgtggccagtgctgtggccaacaatttcgatggtggcggcggcaac
aacaccgtcagctatgcccgtgccaatgatggcaacggcgtcacggtggacctgttccag
cgagtgggcagcaatggttttgctgcaggtgaccagtacaccaacatccagaacgtcatc
ggcagcaactacgatgatctcttcatcgccgacaacaatgccaatagctttgccggtggt
acgggctccaacacggtgagctacgtcaattccacggcggcggtgacggtcaacctggcc
aacggctcgggcagcggcggctttgcccagggcgacagctatagcagcatccagaacgtc
atcggttcggcctttgacgacaccatcctcgccagtagcgacgccaacgtcatcgatggc
ggcagcagcacgtccagttcgcacaaccgggtcagctatgccagctccaacgccgccgtc
acggtggacctgaactacactgacggcaccggcacctcgggtggctatgcggccggcgac
aagctctccaacatccaggatctgaccggcagcagctttgacgataccttcgtggccagc
gctgcggccaacaatttcgatggtggcaccagtaccgccagttcgcacaaccgcgtcagc
tatgccagttccaacgccgccgtcacggtggacctgaactacaccgatggcaccggcacc
tcgggcggctatgcggcgggcgacacgctcaccaacatccaggacctgaccggcagcagc
tacgacgataccttcgtggccagtgctgctgccaaccgtttcgacggtggcgctagcacc
tccagttcacataaccgggtcagctatgccagctccaacgccgccgtcacggtggacctg
aactacaccaatggcaccggtacctcgggcggctacgcggcgggcgacaccctgatcaac
atccaggatctgaccggcagcaactacgacgataccttcgtggccagcgccgccgccaac
ttcctggaaggcggtggcggctccaacacggtcagctatgcccgctccaccagtagcaat
aactctactggcgtgacggtggacctgagcgccggcagcggttcgggcaactacgcccag
ggcgacagctacagcaatatccagaacgtgatcggcagcgactgggccgacaccctgacc
ggcttcgccacgcccggcgtgacttcggtactgaccggtggcaagggcgccgacaacctc
atcgccaatgccgccaaccgggccgatacctatgcctcctacgccggttcttccgccggc
gtgaccatcaacctgcaagccggcagcggcagcggcggcgatgcccagggcgatgtcctg
accaacatcgacaacgtcatcggcagcagcaacaacgataccttcctggccagcgccaat
gccaacaagttcaatggcgaggccggttccgacacggtcaactattcgctctccagcagc
gctgacggtaccaatggcgtgaccgtcgatctctctgcgggcagcggcagcggcaactat
gcgcaaggcgatacctacatcaacatcgagaacgtggttggcagtgcctacaacgacacc
atcaccggctttgccaccaccggcacgcgctcggtgctggaaggcggcgccggggccgac
accatcacggccgtgaacggcaaccgggcctcgacctttgcctcctatgccggctcgggc
tcggcggtgaccatcgacctcaagaacggcagcggcagtggtggcgatgcccagggcgat
gtgctggtcaatatcgacaatgtgattggcagcgcctacaacgacctgttcaaggccagc
acccaggccaacaacttcaatggtggcagcggcggggtcgatacggtgagctatgagtac
gataccggtggcgtgacagtggacttgactaacaccctggcggccaccggcacctatgcg
gccggagataccttcaccaatatcgccaacctcaccggtggctccggcaatgacaccttc
tacgccagctcggtggccaacagtttcgatggcgggggagggaccaatacggtcaactat
gcgcgctcgggcagcacgccggtggtagtggacctgtaccacggcagcggcagcggcggc
tatgccgcaggcgacacctacgccaacatccagaacgtcaccggcagtgccggcagcgat
accttctatgccaatagcgccaccaacgtcttcaatggcggcgccggtggcagcgatacc
gtcagctatctctactcgaccggcaacgacatcaccgccagtctggtttccggcggcagc
ggcggcgacgccagtggtgacagctacgtcggcatctccaacctggaaggcagcgccaac
gtcaacagtaccctgaccggcaacagcggcgccaacgtcctcaccgcgcgcggcaacaac
accaccaattcactcagcggcgggggcgccagttccggcaccgatgtcttcaacgtggtg
gaagggggacacaacagtgtcagcgtgggcagcggcagcaacctgatcaacgtcagcgcc
ggcgccaacagttcggccggggcgcagagcgacatggtcaaccagaacaccggcaacgcc
aacatcgattccatcaacggcggcgccggggtgacgaccttgcacttcgccgacctgggt
tcgcaactccagctcagcaacttcgccagcaagatcaccggcatcaccacgctggacgtg
agtgccggcaacagtaccaacatcatcatcaccgccgatgacgtgcgtcagatgggcatg
gccggcagcggcagttccaagatcctgacggtgaagatgagtaccagcgagagcttgcag
atcatggccaatggctcggaccactacgtctacttccccggtaccaccgactatgccttc
tacaactccagcaaccaggaaatcgcccgtatccacctggtgacggcatag
DBGET
integrated database retrieval system
