Herbaspirillum rubrisubalbicans: Hrubri_1752
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Entry
Hrubri_1752 CDS
T04238
Symbol
alkA
Name
(GenBank) 3-methyl-adenine DNA glycosylase II protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hrubri_1752 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_1752 (alkA)
Enzymes [BR:
hrb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Hrubri_1752 (alkA)
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hrubri_1752 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ALU88956
LinkDB
All DBs
Position
2037145..2037804
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AA seq
219 aa
AA seq
DB search
MNTNRKASDADPSLIVPAYWEDAKAELMKRDRIMRKIIPQFGDLQLTVRGDAFTTLARSV
IGQQISTKAANAVWQRFLQACPRCTPGQVIRTGPEGLAACGLSKRKAEYILDLAAHFKAK
TVHPDKWAEMEDEAVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDLGLLKGISISYF
SGEPVSRSDAREVAANWEPWRTVATWYLWRSLDPLPSDY
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttgaataccaaccgaaaagccagtgacgccgatcccagcctgatcgtgccggcctactgg
gaagacgccaaggccgagctgatgaagcgcgaccgcatcatgcgcaagatcatcccgcag
ttcggggacttgcaattgacggtgcgtggcgatgccttcaccacgctggcgcgttcggtg
atcggccagcagatctcgaccaaggccgccaatgcggtttggcagcgcttcctgcaagcc
tgtccgcgctgcaccccgggccaggtgatccgtaccggcccagaagggctggccgcttgc
ggtttgtccaagcgcaaggccgaatatatcctcgacctggccgcccacttcaaggccaag
acggtacatcccgacaaatgggcggagatggaagacgaagccgtcattgccgagatgatc
cagatccgtgggattggccgctggacagccgagatgtttttgatatttaatctgctgcgc
cccaacgtactgccgctggatgacctgggattgctcaagggcatcagcatcagttacttc
tcgggggagcccgtctcgcgcagcgatgcgcgcgaagtcgccgcgaactgggaaccgtgg
cgcaccgtggccacctggtacctgtggcgcagcctggatccgctgccctccgattattga
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