Herbaspirillum rubrisubalbicans: Hrubri_1789
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Entry
Hrubri_1789 CDS
T04238
Name
(GenBank) recombination factor RarA protein
KO
K07478
putative ATPase
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
Hrubri_1789
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
AAA_5
AAA_16
AAA_22
nSTAND3
AAA_14
ResIII
Sigma54_activat
AAA_3
AAA_33
AAA_30
Sigma54_activ_2
AAA_2
IstB_IS21
Cdc6_lid
Resolvase
AAA_17
AAA_18
AAA_7
Ago_N_3
AAA_24
DUF815
RNA_helicase
SKI
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALU88993
LinkDB
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Position
2080618..2081922
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AA seq
434 aa
AA seq
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MADLFAQEPAAPLAEALRPKTLDEVIGQSHLLGEGKPLRLAFQSGKPHSMIFWGPPGVGK
TTLARLTATAFQCEFIALSAVFSGVKDIRAAMEQAEQNLSMGKHTILFVDEIHRFNKSQQ
DALLPYAESGLVTFIGATTENPSFEVNSALLSRAQVYVLKSLTDDELKLLLKRAQEKALG
ELQFDAQATDTIIGYADGDARRFLNLLEQTETAARTTGTTLVTAEFLQNALTLNSRRFDK
GGDNFYDQISALHKSVRGSHPDAALYWLTRMLDGGADPRYLSRRIVRMAWEDIGLADPRA
MQIANDAALTYERLGSPEGELALGQAVIYLAVAAKSNAGYNAYNAARAFVKQDKSREVPV
HLRNAPTKLMKELGYGHEYRYAHDEPNAYAAGETYLPEGIAEPGWYQPVPRGLEIKIGEK
LATLRQWDEEVGKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctgttcgcgcaagaacccgccgcgcccctggccgaggcgctgcgtcccaag
accctggatgaggtcatcggtcaatcgcacctgctgggcgaaggcaagcccttgcgtctg
gcctttcagtccggcaagccgcactccatgatcttctggggcccgccgggcgtgggcaag
accacgctggcgcggctgacggccacggcgttccagtgtgaattcatcgccttgtcggcg
gtgttctcgggcgtcaaggatatccgcgcggcgatggagcaggccgagcagaacctgtcc
atgggcaagcacaccatcttgttcgtcgatgaaatccatcgtttcaacaagtcgcagcag
gatgcgctattgccctatgccgaaagcggcctggtgaccttcatcggggccacgaccgag
aatccatcgtttgaggtcaactcggcgctgctctcgcgtgcccaggtgtatgtgctcaag
tcgctcaccgacgacgaactcaagctgctgctcaagcgcgcacaggaaaaggcgctgggc
gagctgcaattcgacgcccaggcgaccgacaccatcatcggctatgccgatggcgacgcc
cgccgcttcctgaacctgttggaacagaccgagaccgctgcccgcaccaccggtaccacc
ctggtcacggccgagttcctgcagaatgcgctgaccttgaacagccgccgcttcgacaag
ggcggcgacaatttctacgaccagatctcggcgctgcacaagtcggtgcgtggctcgcac
ccggatgctgcgctgtactggctcacgcgtatgcttgatggcggcgccgatccgcgctac
ctgtcacggcgcatcgtacgcatggcctgggaagacatcggcctggccgacccgcgcgcc
atgcagatcgccaacgatgccgcgctcacctacgagcgcctgggcagcccggaaggcgaa
ctggcgctgggccaggcggtgatctacctggccgtggcggccaagagcaatgccggctac
aacgcctataacgcggcacgcgctttcgtgaagcaggacaagagccgggaagtgccggtg
cacctgcgcaatgcgccgaccaagctgatgaaggagttgggctatgggcatgagtatcgc
tatgcccatgatgaacccaatgcctatgccgctggggagacctacctgcccgagggcata
gcggagccggggtggtatcagccggtgccgcgtgggctggaaatcaagatcggcgagaag
ctggccaccttgcggcagtgggatgaagaggtcggcaagaagtga
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