Herbaspirillum rubrisubalbicans: Hrubri_1822
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Entry
Hrubri_1822 CDS
T04238
Name
(GenBank) DNA recombination and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Hrubri_1822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_1822
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hrubri_1822
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hrubri_1822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ALU89025
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Position
2113444..2114310
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AA seq
288 aa
AA seq
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MTTMLTASKLDAQLDGQAADPAVTPSVPQAPAKAPARKPATPRARSRAVPEKEHKVLAQP
GFVLHSYPYKETSLIIDVFSRDHGRVALVAKGAKRPHSKLRGALQTFQPLSLSWSGKSEV
RTLTDAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVATLNKLAHGENA
PIVLRQFERILLKQTGVAGNWSHCVVSGKAVQPDGIYVVDPEQGTRPERLSDRAPKVSGK
TLLDMEREDYSDPTTQLQSKFLMRYLLAHHLGGAQLNTRQILIDLMQL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgactaccatgctcaccgcttccaagctcgacgctcagcttgacggccaggccgccgac
ccggccgtcacgccgagcgtcccgcaggcgcccgccaaggcccccgcgcgcaagccggcc
acgccgcgcgcgcgcagccgtgcggtgccggagaaggagcacaaggtgctggcgcaaccg
ggcttcgtgctgcacagctatccctacaaggaaaccagcctcatcatcgacgtcttctcg
cgtgaccatggccgcgtggcgctggtggccaagggcgccaagcgtccgcattccaagctg
cgcggcgccttgcagaccttccagccgctctcgctgtcgtggagcggcaagtccgaggtg
cgcaccctgaccgatgccgaatgggtcggtggcctgctgccgctggaaaagtcggccctg
ctgtgcggcttctacctcaatgaattgctggtcaagctgctggcgcgcgaagatgcccac
ccggcactattcgaccattacgtcgccacgctcaacaagctggcccacggcgaaaatgcc
cccatcgtgctgcgccagttcgagcgcatcctcttgaagcagaccggggtggccggcaac
tggagccattgcgtggtcagcggcaaggccgtgcagcccgatggcatctacgtggtcgac
ccggagcagggcacccgcccggaacgcctctccgaccgtgcccccaaggtctccggcaag
actctgctggacatggagcgcgaagactacagcgaccccaccacgcaattgcagagcaag
ttcctgatgcgctatctgctggcgcaccacctgggtggggcgcagttgaatacgcgccag
atcctgatcgacctcatgcaattgtga
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