Herbaspirillum rubrisubalbicans: Hrubri_1890
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Entry
Hrubri_1890 CDS
T04238
Name
(GenBank) Capsule polysaccharide biosynthesis
KO
K07265
capsular polysaccharide export protein
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Hrubri_1890
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Gene cluster
GFIT
Motif
Pfam:
Capsule_synth
NAD_binding_11
Motif
Other DBs
NCBI-ProteinID:
ALU89083
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Position
complement(2176359..2177726)
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AA seq
455 aa
AA seq
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MKIAIFVLADMFVPLMLSTGKSLERQGHQVRYLNFLPHDHKLLGKNTDQLYPRNLETLDG
AAQAQEILFPQDTVQEMVNFMQMKHGGSLTEWHDRVNTVARYVQRFLEEQQPALFVVWNG
QDHIGQVIRVLCQRQNIPVVYLENGYFANTLQADLAGVNASATLADLDYDAVLALAQAQL
STTTAEIAAPTCEIRALTRTQLAAIALAHRTNLAYYTQYPEQRGSSRIKTWKIKRERAAI
ANDQLTLPEQFAFVPLQVHDDTQVLLNSRLVHSVEEFFETVHAAIRRNCGPDYPIIVKEH
PEDLGRYDYSQLRQKYPDVIWLRKFDIELLLDRATMVFVINSSVGLQAVRRKKPTVVLGE
SFYSKPEIAFVVKDLAQLDSTVQQAAAGVDEMMSARIDRFLAALDLTLFVKGTWKYPACV
QAGPALAERLLALYARSPQAIASDGGTPREVLANG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgccatcttcgtcctggccgacatgttcgtgccgctcatgctcagcaccggc
aagagcctggagcgccaaggccatcaggtgcgctacctgaacttcctgccccacgatcac
aagctgctgggcaagaacaccgaccagctctatccgcgcaacctggaaaccctggatggg
gctgcccaggcgcaggagatcctgttcccgcaggataccgtgcaagagatggtcaacttc
atgcaaatgaagcatggcggcagcctgaccgagtggcatgaccgcgtcaatacggtggcg
cgctatgtacagcgcttcctggaagagcaacagcccgcactgttcgtcgtctggaatggc
caggaccacatcggccaagtcatccgcgtgctgtgccagcgccagaacattccagtggtc
tacctggaaaacggctacttcgccaacaccttgcaagctgacctggccggagtcaatgcc
tcggccaccctggcagacctggattacgatgccgtgctcgccctggcccaggcacagctg
tcgacaacgacggccgagatagccgcaccaacctgcgaaatccgtgcgctcacccgcacg
caattggcggccatcgcactggctcatcgcaccaacctggcctattacactcaatatccc
gagcaacgtggatccagccgcatcaagacctggaagatcaagcgcgaacgggccgccatt
gccaacgaccagctcacgctgccagaacagtttgccttcgtaccgctgcaggtgcatgac
gatacccaggtgctgctcaattccaggctggtgcattcggtggaagaattcttcgagacg
gtacacgccgccatccgccgcaactgcggaccggactaccccatcatcgtcaaggaacat
ccggaagacctggggcgctatgactacagccagttgcgtcagaagtatcccgatgtgatc
tggctgcgcaagttcgacatcgagcttttgctggaccgcgccaccatggtcttcgtgatc
aactcttcggtcggcctgcaagcagtgcgtcgcaagaagcccaccgtagtattgggtgaa
tccttctattccaagccggagatcgccttcgtggtcaaggatctagcacagctcgatagc
accgtacagcaggcagccgcgggcgtggatgagatgatgtcggcgcgtatcgatcgcttc
ctggcagcgctagatttaacgctcttcgtcaagggcacgtggaaatacccggcgtgtgtc
caagccggaccggcgctggccgagcgtttgctggccctgtatgcgcgcagcccgcaagcc
atcgccagcgatggcggtacaccgcgcgaggtactcgccaacggctga
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