Herbaspirillum rubrisubalbicans: Hrubri_1895
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Entry
Hrubri_1895 CDS
T04238
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase protein
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
K03270
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:
3.1.3.45
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00541
Biosynthesis of various nucleotide sugars
hrb01100
Metabolic pathways
hrb01250
Biosynthesis of nucleotide sugars
Module
hrb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Hrubri_1895
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Hrubri_1895
Enzymes [BR:
hrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Hrubri_1895
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.45 3-deoxy-manno-octulosonate-8-phosphatase
Hrubri_1895
Lipopolysaccharide biosynthesis proteins [BR:
hrb01005
]
Lipid A
Hrubri_1895
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Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Hydrolase
Hydrolase_3
HAD_2
Hydrolase_6
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
ALU89088
LinkDB
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Position
complement(2181966..2183246)
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AA seq
426 aa
AA seq
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MHCIAVIPARFGSSRLPGKPLADILGKPMIQHVYERVRSLDELADVVVATDDERIVAAVN
AFGGKALLTSPHHPSGTDRLREVMQHHPADLYLNVQGDEPLVNPTHLRSLLQAMLAAPQV
QAGTLCHAITAGEAENPNTVKVVRNRAGDALYFSRARIPFERESSGKARYFKHIGVYAYR
AELLAAFPGLPPSELEGAEMLEQLRIMDAGWQIRVIEVDHAAPGVDTPACLERVRALMSG
LPDPALKTGSLADVKLVITDIDGVLTDGGIWYDDSGECLKRFHVRDGMGIKMLQEAGVNV
AVISGRDSATLRRRLADLGITVFQLGAKDKAGACRAIMEQFQVGPEATAMIGDDSIDLPG
FAACAWPVAVDDAPDYVKRHARVVLTKAGGQGAFREFSDSVLNAQNRSAIYDSVAGYAQA
MSRMAQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtatcgctgtcattccggcccgcttcggctccagtcgcctgcccggcaagcct
ctcgccgacattctgggcaagcccatgatccagcacgtctatgaacgtgtgagaagtctc
gatgaactggccgacgtggtggtagccacagacgatgaacgcatcgttgccgccgtgaac
gccttcggaggcaaggccctgttgacctcgcctcaccatccctccggcaccgaccgccta
cgcgaggtgatgcaacaccatccggccgatctctacctcaacgtgcagggtgacgagcct
ctggtcaatccgacgcacctgcgcagcctgctgcaagccatgctggcggccccccaggtg
caggccggcacgctgtgccatgccattaccgcaggcgaggccgagaaccccaataccgtc
aaggtagtgcgcaaccgggccggggatgcgctgtatttcagccgcgcacgcatccccttc
gaacgcgagtccagcggcaaggcccgttacttcaaacatattggcgtgtatgcgtatcgc
gccgaactgctggccgctttcccgggattgccccccagtgaactggaaggcgcagaaatg
ctggaacaactgcgcatcatggatgccggttggcagatccgcgtgatcgaagtcgaccat
gcggcacccggcgtagatacgccggcttgcctggagcgcgtgcgcgcactcatgtccggt
ctgccggacccggcgctgaagaccggcagcctggccgacgtgaagctggtcatcaccgat
atcgacggcgtactcaccgatggcggcatctggtacgacgacagtggcgaatgcctcaag
cgcttccacgtgcgcgatggcatgggcatcaagatgctgcaggaagccggcgtcaacgtg
gccgtgatctccggtcgcgattcggccaccctgcgccgccgcctggctgacctgggcatc
accgtgttccaactcggtgccaaggacaaggccggcgcctgccgggccatcatggagcaa
ttccaggtcggccccgaagccaccgccatgatcggtgacgacagcatcgacctgcccggc
tttgccgcctgcgcctggccggtggccgtcgatgacgcgccggactacgtcaaacgtcat
gcccgcgtggtgctgaccaaggcgggcgggcaaggggccttccgtgaattttccgatagc
gtattgaacgcacagaaccgttcagccatctatgacagcgttgctggatatgcccaggcc
atgagccgcatggcgcagtaa
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