Herbaspirillum rubrisubalbicans: Hrubri_2010
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Entry
Hrubri_2010 CDS
T04238
Symbol
spoT
Name
(GenBank) bifunctional (P)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase protein
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00230
Purine metabolism
hrb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Hrubri_2010 (spoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrb03009
]
Hrubri_2010 (spoT)
Enzymes [BR:
hrb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
Hrubri_2010 (spoT)
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
Hrubri_2010 (spoT)
Ribosome biogenesis [BR:
hrb03009
]
Prokaryotic type
Other maturation factors
Hrubri_2010 (spoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
UreF
ACT
Spherulin4
Motif
Other DBs
NCBI-ProteinID:
ALU89202
UniProt:
A0A0U3LEQ2
LinkDB
All DBs
Position
complement(2303036..2305300)
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AA seq
754 aa
AA seq
DB search
MSLTTTDSTLSAAASSKRAAGSGRTATPQEVAPAAAHSGVATFAHLIPKLEEYLTPSELK
KVKEAYRFADEMHLGQMRKSGEPYISHPLAVAEICAEWKLDAQAMMAAFLHDVMEDQGVK
KEELIERFGASVASLVDGLSKLDKIEFQSQVEAQAENFRKMLLAMARDVRVILVKLADRL
HNMRTLGSMPPEKKRRISRETMEVYVPIAHRLGLNNIYRELQELSFSHLYPLRHRTLSKA
VKAARGNRREVVTKIMESVTSTLIAAGIPAQVDGREKTLYGIYRKMRNKHLSFSQVLDVY
GFRVVVDSFANCYVALGTLHSLFKPMPGKFKDYIAIPKLNGYQSLHTTLIGPYGTPVEFQ
IRTTEMHRVAESGVAAHWLYKDDEGSLTDLQQRTHAWLQSLLDIQKQTGDSAEFLEHVKV
DLFPDSVYVFTPKSKIIALPRGATALDFAYSIHTDIGDQTTSVIINHEPAPLRSELHNGD
IVEIITSPTSRPSPNWLGYVRTGKARSAIRHRLRTANRVESQTVGRRLLGNALHTLGIEP
ELPSHIVERLLNESSAKTMDDLYAEIGIGTRMAPLVARHIMTMMDTGVSVPQLDPEGHML
PNKPDPVVITGSEGASAQLSSCCMPIPGDRLTGYLKPDQTLIVHTQECETAKRLHEKEPD
RWIELVWGHDLNRRFDCRITILIHNERGTLARIAAEIGESDANIVSVAMDDEGGNASMKY
LRFTIQIEDRVHLARLMRGIRKIDSVARILRERG
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcaccactaccgactccaccttatcagccgctgctagctccaaacgtgccgcc
ggttccggccgcaccgcaactccccaggaagtcgcccctgccgctgcccatagcggcgtg
gcgacttttgcgcacctgatccccaagctcgaagaatacctgacgccttccgaactgaag
aaggtcaaggaagcctatcgctttgccgatgagatgcacctgggccagatgcgcaagtcc
ggcgagccctatatctcgcatccgctggcggtggccgagatctgcgccgaatggaagctc
gatgcccaggccatgatggcggccttcctgcatgacgtgatggaagaccagggcgtcaag
aaggaagagctgatcgaacgcttcggtgcctccgtcgcctcgctggtggatggtctgtcc
aagctggacaagatcgaattccagagccaggtcgaagcgcaggcggagaatttccgcaag
atgctcctggccatggcacgcgacgtgcgggtgatcctggtcaagctggccgaccgcctg
cacaacatgcgtaccctgggctccatgccgcccgaaaagaagcgccgcatctcgcgcgag
accatggaagtctacgtgcccatcgcgcaccgcctgggcctcaacaatatctaccgcgaa
ctgcaggaactgtccttctcgcacctctacccgctgcgccaccgtaccctgtccaaggca
gtcaaggcggcccgcggcaaccgccgcgaggtggtgaccaagatcatggagtcggtcacc
agcaccctgattgccgccggcatcccggcccaggtcgatggccgcgaaaagaccctctac
ggcatctaccgcaagatgcgcaacaagcacctgagcttctcgcaggtgttggatgtctac
ggtttccgggtggtggtggacagctttgccaactgctacgtggcgctgggcaccctgcat
tcgctcttcaagccgatgccgggcaagttcaaggattacatcgccattcccaagttgaat
ggctaccagtcgctgcacaccaccctgatcggcccctacggcacgccggtcgagttccag
atccgtaccaccgagatgcaccgcgtggccgaatccggcgtggctgcgcactggttgtac
aaggatgacgaaggcagcctgaccgacctgcagcagcgcacccatgcctggctgcagtcg
ctgttggacatccagaagcagaccggcgattcggccgagttcctggaacacgtcaaggtc
gacctgttccccgattcagtgtatgtcttcacacccaaatcgaagatcatcgccctgccg
cgtggcgccacggcgctcgattttgcctacagcatacacaccgacatcggcgaccagacc
acctcggtcatcatcaatcacgaaccggcaccgctgcgctcggaactgcacaatggcgac
atcgtcgagatcatcacctcgccgacctcccgccctagccccaactggctaggctacgtg
cgcaccggcaaggcgcgttcggccatccgccaccgcctgcgcacggccaaccgggtcgag
tcgcagaccgtgggacgccgcttgttgggcaacgctcttcatacactgggcatcgaacct
gaacttccttcccatatcgtcgagcgcctgctcaacgaatccagcgccaagaccatggat
gacctgtatgccgagatcggcatcggcacccgcatggcaccgctggtagcacgccacatc
atgaccatgatggataccggcgtgagcgtgccgcagctggacccggaaggccacatgctg
cccaacaagcccgacccggtggtcatcaccggcagcgaaggggcgtcggcacaattgtcg
tcctgctgtatgccgattccgggcgaccgcctgaccggctatctcaagccggaccagacc
ctgatcgtgcatacccaggaatgcgagaccgccaagcgcctgcacgagaaggagccggac
cgctggatcgaactggtctggggccatgacctgaatcgtcgcttcgattgccgcatcact
atcctgatccacaacgagcgcggcacgctggcccgcatcgccgccgaaatcggcgaatcg
gacgccaacatcgtctcggtggccatggatgacgaaggtggcaatgcgtcgatgaaatac
ctgcgcttcaccatccagattgaggatcgcgtgcatctggcgcgcctcatgcgcggcatc
cgcaagatcgacagcgtggcgcgtatcctgcgcgaacgcggctga
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