Herbaspirillum rubrisubalbicans: Hrubri_2033
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Entry
Hrubri_2033 CDS
T04238
Symbol
radA
Name
(GenBank) ATP-dependent serine protease protein
KO
K04485
DNA repair protein RadA/Sms
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_2033 (radA)
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hrubri_2033 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
DUF7125
AAA_22
GvpD_P-loop
Lon_C
ChlI
AAA_24
AAA_16
Rad51
RecA_N
SLFN-g3_helicase
AAA
AAA_14
CobU
ATPase_2
nSTAND3
DUF7129
nSTAND_NTPase5
AAA_5
NTPase_1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ALU89224
LinkDB
All DBs
Position
2325432..2326817
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AA seq
461 aa
AA seq
DB search
MAKVKTNYTCTECGGISNKWAGQCPACGQWNTLVETLVEASGGNRYSSGPQSLAQTAPVL
SLADIEAIDVPRFGTGIEEFDRVLGGGLVPGGVALIGGDPGIGKSTLLLQALANISKLKK
VLYVSGEESGSQIALRAKRLAVDARELQLQAEIQLEKILATLAEHKPEVAVIDSIQTLYS
DALTSAPGSVAQVRECAAQLTRVAKTSGITIIMVGHVTKEGALAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAFKNRFGAVNELGVFAMTEKGLKGVSNPSALFLSQHENQVPGSCVMVTQ
EGTRPLLVEIQALVDSSHVPNARRLSVGLEQNRLAMLLAVLHRHAGVAAFDQDVFINAVG
GVKITEPAADLAVLLAINSSMRNKPLPRGLVVFGEVGLAGEIRPAPRGQERLREAAKLGF
SIAVIPKANAPKQPIEGLRVIAVERIDDALQKAREIDDYAA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtcaagaccaattacacctgcaccgagtgcggcgggatcagcaacaaatgg
gccggccagtgtccggcctgcgggcagtggaacaccctggtcgagaccctggtggaagcc
agcggcggcaaccgttattcctcgggcccgcaaagcctggcgcagacggctccggtgctg
agcctggccgatatcgaggccatcgacgtgccgcgctttggcaccggcatcgaggaattc
gaccgcgtgctgggcggcggcctggtaccgggtggcgtggccctgatcggcggcgacccc
ggcatcggcaaatcgaccctgctgctgcaggcgctggccaatatctccaagctcaagaaa
gtcctctatgtgagcggcgaagagtccggctcccagatcgccctgcgcgccaagcggctg
gcggtggatgcgcgcgagctgcaattgcaggccgagatccagctggaaaagatcctggct
actctggccgagcacaagcccgaagtggcggtgatcgactccatccagaccctgtattcg
gatgcgttgacctcggctcccggctcggtggcgcaggtgcgcgaatgcgcggcgcaattg
acgcgggtcgccaagacttccggcatcaccatcatcatggtcggccacgtgaccaaggaa
ggcgcgctggccggcccgcgcgtgctggagcacatcgtcgatacggtgctctacttcgag
ggcgatacccattccagcttccgcctggtgcgcgccttcaagaaccgctttggcgcggtc
aacgaactgggcgtgttcgccatgaccgagaagggcttgaagggggtctccaatccttcg
gccctgttcctgtcgcagcatgagaatcaggtgccaggctcctgcgtcatggtgacccag
gagggcacgcgtccgctgctggtggaaatccaggcgctggtggacagctcgcacgtgccc
aatgcgcgccggctatcggtggggctggagcagaaccggctggcgatgctcctggccgtg
ctgcatcgacatgccggcgtggcggctttcgatcaggatgtgttcatcaatgcagtcggt
ggcgtgaagattaccgagccggccgccgacttggcggtgttgctggccatcaattcctcg
atgcgcaacaagcccttgccgcgcgggctggtggtgttcggggaagtcggcttggccggc
gagatccgtcccgccccgcgcggtcaggagcgcttgcgcgaggcagccaagctgggcttt
tccatcgccgtgatccccaaggccaatgcgcccaaacagcccatcgagggcttgagggtg
attgctgtggagcgcattgacgacgccttgcagaaggcgcgcgagatcgacgattacgcc
gcctga
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