Herbaspirillum rubrisubalbicans: Hrubri_2040
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Entry
Hrubri_2040 CDS
T04238
Name
(GenBank) ABC-type transport system, duplicated ATPase component protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
hrb03012
]
Hrubri_2040
Translation factors [BR:
hrb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Hrubri_2040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
ABC_tran_CTD
MMR_HSR1
RsgA_GTPase
AAA_16
MeaB
ATP-synt_ab
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ALU89231
LinkDB
All DBs
Position
complement(2331822..2333804)
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AA seq
660 aa
AA seq
DB search
MIRFQQVSLQRGVKPLLENVDLTLNPGDKIGLIGANGAGKSSLFAMLRGELHPDLGNIDY
PARWRMAYVAQETPALDRPAIEYAIDGDAHLRQLEAELARAEAQPDDKHDGNHVAELHTA
LADADAYTVRSRAEQLLLGLGFSLEQMERPVASFSGGWRMRLNLAQALMCPSDLLLLDEP
TNHLDLDAIIWLEDWLKRYEGTLLIISHDRDFLDGVVNVIVHIDDRKLKRYSGNYSAFER
QRSAQLELMAGMIEKQQRQRAHLQSFIDRFKAKATKARQAQSRMKALSKMEELAPLRAAA
EFSFEFREPLSAPNPLLVMEKVNAGYHIEGKNGAPDADKIIVHGIDFSLQNGQRIGLLGV
NGAGKSTLIKTVAGEIDPLSGTARLGKGLVIGYFAQHQVEMLRHDESPLWHLTRLAPDVR
EQELRNFLGSFNFNGTMATSSIAPFSGGEKARLALALIVWQRPNLLLLDEPTNHLDLETR
EALTMALAQFEGTLVLVSHDRHLLRATTDQFLIVAEGKLQPFDGDLDDYKDWLFKTKLAA
RNDAAAAAPLPTSSQPVEAAPASLVDRKEQKRLEAEQRQKMSALKKPIEARIKRLDEQIA
KLNVRKGEIDARLASPDIYDAANKDELKTLITDQAYCSKELEQLENEWLEQQEALEQLQA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtttccagcaagtttccctccagcgtggcgtcaagccgctgttggagaatgtc
gacctgacactcaacccgggcgacaagatcggcctgatcggcgccaatggcgctggcaag
tccagcctgttcgccatgctgcgcggcgagctgcaccccgacttaggcaatatcgattac
ccggcgcgctggcgcatggcctacgtggcgcaggaaaccccggcgctggaccggccggcc
atcgaatacgccatcgatggcgatgcccatctgcgccagttggaagccgagctggcccgc
gcggaagcgcagccggacgacaagcacgatggtaatcacgtcgccgaactgcacaccgcc
ctggccgatgccgatgcctataccgtgcgctcgcgtgccgagcaattgctgctggggctg
gggttttcgctggagcagatggaacggccggtggccagcttctccggtggctggcgcatg
cgcctgaacctggcgcaggcgctgatgtgtccgtccgacctgctgctgctggacgaacca
accaaccacctggacctggatgccatcatctggctggaagactggttgaagcgctatgag
ggcacgctgctcatcatttcacacgaccgcgatttcctggatggcgtggtgaacgtgatc
gttcatatcgatgatcgcaaactgaagcgttattccggcaactacagcgccttcgagcgc
cagcgctcggcccagctggaactgatggcggggatgatcgagaagcagcagcgccaacgc
gcgcacctgcaatccttcatcgaccgcttcaaggccaaggcgaccaaggcgcgccaggca
cagagccgtatgaaggctttgtccaagatggaagagctggcaccgctgcgggcagcagcc
gagttctcgtttgaattccgcgaacccttgtcggcaccgaatccgttgctggtgatggaa
aaggtcaacgccggctatcacatcgagggcaagaacggcgcgcccgatgcagacaagatc
atcgtgcatggcatcgatttctcactgcagaatggccagcgcattggtctgttgggcgtc
aacggcgccggtaaatcgacgctcatcaagacggtggcgggcgagatcgatccgctttcc
gggacggcccggctgggcaagggcctggtgatcggttacttcgcccagcatcaggtggag
atgctgcgccatgacgaatcgcctctgtggcacttgacccggctggcgcccgatgtgcgt
gagcaggaattgcgcaatttcctgggcagcttcaatttcaacggcaccatggctacctcc
tccatcgcccccttctcgggcggcgaaaaggcgcgcctggcgctggccctgatcgtctgg
cagcgccccaacctgttgctgctggacgaaccgaccaaccacctcgacctggaaacccgc
gaagccctcaccatggcgctggcgcagttcgagggcacgctggtgctggtatcccacgat
cgccacctgctgcgcgccacgactgaccagttcctgatcgtggccgaaggcaagctgcaa
cccttcgatggcgacctggacgactacaaggattggctcttcaagaccaagctggccgcc
cgcaatgatgccgcagccgctgcgccgctgccgacctccagccagccggtggaagccgct
ccggcttctctggtggaccgcaaggaacagaagcgcctggaggccgaacagcgccagaag
atgtcggccctgaaaaagcccatcgaggcgcgcatcaagcggctcgatgagcagatcgcc
aagctcaacgtccgcaagggcgagattgatgcccgcctggccagccccgacatctacgat
gccgccaacaaggatgagctcaagacgctcatcaccgaccaggcctattgcagcaaggag
ctggaacagctggaaaacgaatggctggaacagcaggaagcactggagcaattgcaggcc
tga
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