Herbaspirillum rubrisubalbicans: Hrubri_2112
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Entry
Hrubri_2112 CDS
T04238
Symbol
ppiD
Name
(GenBank) peptidyl-prolyl cis-trans isomerase D protein
KO
K03770
peptidyl-prolyl cis-trans isomerase D [EC:
5.2.1.8
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
hrb03110
]
Hrubri_2112 (ppiD)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
Hrubri_2112 (ppiD)
Chaperones and folding catalysts [BR:
hrb03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
Hrubri_2112 (ppiD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SurA_N_3
Rotamase_3
Rotamase
Rotamase_2
SurA_N_2
SurA_N
UVB_sens_C
Motif
Other DBs
NCBI-ProteinID:
ALU89303
LinkDB
All DBs
Position
2422584..2424503
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AA seq
639 aa
AA seq
DB search
MFDFIRTHQRLMQFLLLLFIFPSFAFFGLEGYSRLTDDSGVAKVAGQTITKEEWDAAHRQ
QLERMRQVYGNQFDAKIFDSPQARRAILDNLIAQRALGAEVVANKLVVPDQVLQQSILQI
PGLTKPDGSFDNEQYRVLLAAQGLTPKSYEASLRREMAVQQLNAAIQSTAFAPKTVAENL
SNLNDQERTVQMLNFKPESYAAQVKISDDMLKAYYDKNGARFETPEQADIEYVVLDAAAV
AAQASVTDDDIKSYYEQNQKQYTTEEQRRASHILIAVKKDASAADKAAAKSKAEALVAQL
RKNPGDFAKLAKADSQDPGSAENGGDLGYFGKGAMVKPFEDAAFSLKQGQISDPVESDFG
YHIIEVTGIKPAAVKPLDAVKAEIGAEIKKQIAAKKYSEMADQFNNLVYENGDSLKAVSD
KLKLKIQTASGVTRTPNPAAGAAPYNNAKFLTALFTDDVIKGKHNSEAVQTAPNTLVAGR
MTSYKPVTKRPFDEVKAEVQKDVLAAEEQALAVKAGQERLAQLQAKDDATGFSDPKVVSR
VKSEGWTQEAFNAVMKADTAKLPAYAGAETTGLGYQIYRITKVEQPKTVDTARRKAEQEQ
ITAALSQQEALGYLDYLREKAKTKLLKGATAVSGDDAAK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatttcattcgtactcaccagcgcctgatgcagttcttgctgctgctgttcatc
tttccgtcgttcgccttcttcggcctggaaggctacagccgcctgaccgacgacagcggc
gtggccaaggtggccggccagaccatcaccaaggaagaatgggacgccgcgcaccgccag
cagctggaacgtatgcgccaggtctatggcaaccagttcgacgccaagatcttcgatagc
ccccaggcgcgccgcgccatcctggacaacctgatcgcccagcgcgctctgggcgccgaa
gtggtggccaacaagctggtggtgccggaccaggtgctgcagcagagcatcctgcagatc
cccggcctgaccaaaccggacggcagcttcgacaatgaacagtaccgcgtgctgctggcc
gcccagggcctcacccccaagtcctatgaagccagcctgcgccgcgagatggccgtgcag
cagttgaatgccgccatccagagcaccgctttcgcccctaagaccgtggccgagaacctg
tccaacctgaatgaccaggaacgcacggtgcagatgctcaatttcaagccggagagctac
gccgcccaggtcaagatcagcgacgacatgttgaaggcctactacgacaagaatggcgcc
cgcttcgaaaccccggaacaggccgacatcgaatacgtggtgctggacgcagccgccgtg
gctgcccaggccagtgtgaccgatgacgacatcaagtcctactacgagcagaaccagaag
cagtacaccaccgaagagcagcgtcgtgccagccacatcctgatcgccgtcaagaaggat
gcctcggctgccgacaaggctgccgccaagagcaaggccgaagccctggtggcgcaactg
cgcaagaatccgggtgacttcgccaagttggccaaggccgattcgcaagaccccggctcg
gccgaaaacggcggcgacctgggttactttggcaagggcgccatggtcaagcccttcgaa
gatgccgctttcagcctcaagcaaggccagatcagcgatccggtggaatccgacttcggc
taccacatcatcgaagtgaccggcatcaagccggccgcggtcaagccgctggacgcggtc
aaggccgagatcggtgccgagatcaagaagcagatcgccgccaagaagtattccgagatg
gccgaccagttcaacaacctggtctatgaaaacggtgacagcctcaaggccgtctccgac
aagctcaagctgaagatccagaccgcttccggcgtgacccgtacgcccaatccggccgct
ggtgctgcgccctacaacaacgccaagttcctgacagcgctctttaccgacgacgtcatc
aagggcaagcacaactccgaagccgtgcagactgcgcccaacaccctggtggccggtcgc
atgaccagctacaagccggtcaccaagcgtcccttcgacgaagtcaaggctgaggtgcag
aaggatgtgctggccgccgaagaacaggcactggccgtcaaggctggtcaggaacgcctg
gcgcagttgcaggccaaggatgatgccacgggctttagcgaccccaaggtggtgtcgcgc
gtgaagtccgagggctggacccaggaggccttcaatgccgtcatgaaggccgataccgcc
aagctgcctgcgtatgcaggcgccgagaccaccggcctgggttaccagatctaccgcatc
accaaggtggaacagcccaagacggtcgataccgcgcgccgcaaggccgaacaggagcag
atcaccgccgccttgtcgcaacaggaagccctgggttacctggactacctgcgtgaaaag
gccaagaccaagctcttgaagggcgccaccgccgtcagcggcgacgacgccgccaagtga
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